Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19300

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
4,363,087	+		PFLU_RS19295	0.18	-0.2
4,363,087	+		PFLU_RS19295	0.18	+1.0
4,363,087	+		PFLU_RS19295	0.18	+0.5
4,363,087	+		PFLU_RS19295	0.18	-0.2
4,363,087	+		PFLU_RS19295	0.18	+0.8
4,363,087	+		PFLU_RS19295	0.18	+0.9
4,363,087	+		PFLU_RS19295	0.18	+1.8
4,363,088	-		PFLU_RS19295	0.18	+0.8
4,363,088	-		PFLU_RS19295	0.18	-0.2
4,363,088	-		PFLU_RS19295	0.18	-2.9
4,363,245	+		PFLU_RS19295	0.34	-1.7
4,363,245	+		PFLU_RS19295	0.34	+1.0
4,363,245	+		PFLU_RS19295	0.34	-0.4
4,363,357	+		PFLU_RS19295	0.46	-0.4
4,363,357	+		PFLU_RS19295	0.46	-0.0
4,363,357	+		PFLU_RS19295	0.46	+0.9
4,363,357	+		PFLU_RS19295	0.46	-0.9
4,363,358	-		PFLU_RS19295	0.46	+0.4
4,363,358	-		PFLU_RS19295	0.46	+0.4
4,363,358	-		PFLU_RS19295	0.46	+2.3
4,363,358	-		PFLU_RS19295	0.46	+1.0
4,363,576	+		PFLU_RS19295	0.69	+0.3
4,363,576	+		PFLU_RS19295	0.69	+0.2
4,363,576	+		PFLU_RS19295	0.69	-1.2
4,363,576	+		PFLU_RS19295	0.69	-1.4
4,363,576	+		PFLU_RS19295	0.69	+0.4
4,363,576	+		PFLU_RS19295	0.69	-0.8
4,363,576	+		PFLU_RS19295	0.69	+1.6
4,363,576	+		PFLU_RS19295	0.69	+3.5
4,363,576	+		PFLU_RS19295	0.69	+0.3
4,363,576	+		PFLU_RS19295	0.69	+2.0
4,363,576	+		PFLU_RS19295	0.69	+3.2
4,363,576	+		PFLU_RS19295	0.69	+0.1
4,363,577	-		PFLU_RS19295	0.69	-0.7
4,363,577	-		PFLU_RS19295	0.69	+0.5
4,363,577	-		PFLU_RS19295	0.69	+1.1
4,363,577	-		PFLU_RS19295	0.69	-0.3
4,363,577	-		PFLU_RS19295	0.69	+0.6
4,363,577	-		PFLU_RS19295	0.69	+0.9
4,363,577	-		PFLU_RS19295	0.69	-0.0
4,363,577	-		PFLU_RS19295	0.69	+1.3
4,363,577	-		PFLU_RS19295	0.69	-0.9
4,363,577	-		PFLU_RS19295	0.69	-0.1
4,363,577	-		PFLU_RS19295	0.69	-0.0
4,363,579	+		PFLU_RS19295	0.69	+0.9
4,363,579	+		PFLU_RS19295	0.69	+1.3
4,363,579	+		PFLU_RS19295	0.69	-2.8
4,363,579	+		PFLU_RS19295	0.69	+1.3
4,363,579	+		PFLU_RS19295	0.69	+2.0
4,363,579	+		PFLU_RS19295	0.69	-0.0
4,363,579	+		PFLU_RS19295	0.69	+0.9
4,363,579	+		PFLU_RS19295	0.69	+1.0
4,363,579	+		PFLU_RS19295	0.69	-0.7
4,363,579	+		PFLU_RS19295	0.69	+0.7
4,363,579	+		PFLU_RS19295	0.69	+1.1
4,363,579	+		PFLU_RS19295	0.69	+0.6
4,363,579	+		PFLU_RS19295	0.69	-2.1
4,363,579	+		PFLU_RS19295	0.69	-0.7
4,363,579	+		PFLU_RS19295	0.69	+0.4
4,363,579	+		PFLU_RS19295	0.69	+1.9
4,363,579	+		PFLU_RS19295	0.69	+1.3
4,363,580	-		PFLU_RS19295	0.69	-2.6
4,363,580	-		PFLU_RS19295	0.69	+0.6
4,363,580	-		PFLU_RS19295	0.69	-0.5
4,363,580	-		PFLU_RS19295	0.69	-0.1
4,363,580	-		PFLU_RS19295	0.69	-1.2
4,363,580	-		PFLU_RS19295	0.69	+0.3
4,363,580	-		PFLU_RS19295	0.69	-1.0
4,363,580	-		PFLU_RS19295	0.69	+0.2
4,363,580	-		PFLU_RS19295	0.69	+2.3
4,363,795	+				+2.3
4,363,795	+				+2.7
4,363,795	+				+3.1
4,363,795	+				+2.4
4,363,795	+				+1.3
4,363,795	+				+2.0
4,363,795	+				+1.2
4,363,795	+				+2.0
4,363,796	-				-0.6
4,363,796	-				+0.3
4,363,796	-				-0.2
4,363,796	-				+0.7
4,363,796	-				-0.5
4,363,796	-				-1.3
4,363,796	-				-1.4
4,363,796	-				-1.4
4,363,796	-				+1.2
4,363,815	-				+2.0
4,363,821	+				+2.1
4,363,821	+				+1.2
4,363,821	+				+1.7
4,363,822	-				+0.2
4,363,822	-				-0.7
4,363,822	-				+0.3
4,363,822	-				-0.0
4,363,822	-				-0.6
4,363,825	+				+0.7
4,363,825	+				+3.4
4,363,825	+				+2.0
4,363,825	+				+2.6
4,363,825	+				+3.4
4,363,825	+				+1.8
4,363,826	-				-0.6
4,363,826	-				+1.2
4,363,826	-				-1.0
4,363,826	-				-1.6
4,363,826	-				-0.9
4,363,837	+				+1.2
4,363,857	+				+2.4
4,363,976	+				+1.2
4,363,976	+				+0.1
4,363,976	+				+0.8
4,363,976	+				+0.6
4,363,976	+				+1.9
4,363,976	+				-0.9
4,363,976	+				+0.3
4,363,976	+				+1.0
4,363,976	+				-0.1
4,363,976	+				+0.4
4,363,976	+				+0.3
4,363,976	+				+1.7
4,363,976	+				+0.4
4,363,976	+				+0.4
4,363,977	-				+0.5
4,363,977	-				+0.3
4,363,977	-				-0.8
4,363,977	-				-2.1
4,363,977	-				-1.5
4,363,977	-				+0.6
4,363,977	-				+0.7
4,363,977	-				-1.2
4,363,977	-				+0.1
4,363,977	-				+0.2
4,364,054	+		PFLU_RS19300	0.22	+0.8
4,364,054	+		PFLU_RS19300	0.22	-0.1
4,364,054	+		PFLU_RS19300	0.22	+0.4
4,364,054	+		PFLU_RS19300	0.22	+1.4
4,364,054	+		PFLU_RS19300	0.22	+0.3
4,364,054	+		PFLU_RS19300	0.22	+0.1
4,364,055	-		PFLU_RS19300	0.22	+2.4
4,364,055	-		PFLU_RS19300	0.22	-0.3
4,364,056	+		PFLU_RS19300	0.22	-0.1
4,364,057	-		PFLU_RS19300	0.22	+0.3
4,364,339	+		PFLU_RS19300	0.76	+1.4
4,364,339	+		PFLU_RS19300	0.76	+1.8
4,364,339	+		PFLU_RS19300	0.76	+3.0
4,364,339	+		PFLU_RS19300	0.76	+2.5
4,364,339	+		PFLU_RS19300	0.76	+1.8
4,364,339	+		PFLU_RS19300	0.76	+2.5
4,364,339	+		PFLU_RS19300	0.76	+2.0
4,364,339	+		PFLU_RS19300	0.76	+1.3
4,364,339	+		PFLU_RS19300	0.76	+1.6
4,364,339	+		PFLU_RS19300	0.76	+0.1
4,364,339	+		PFLU_RS19300	0.76	+1.9
4,364,339	+		PFLU_RS19300	0.76	+1.2
4,364,339	+		PFLU_RS19300	0.76	+1.2
4,364,339	+		PFLU_RS19300	0.76	+1.3
4,364,340	-		PFLU_RS19300	0.76	+1.1
4,364,340	-		PFLU_RS19300	0.76	+0.5
4,364,340	-		PFLU_RS19300	0.76	-0.5
4,364,340	-		PFLU_RS19300	0.76	+0.5
4,364,340	-		PFLU_RS19300	0.76	+1.1
4,364,340	-		PFLU_RS19300	0.76	+1.4
4,364,340	-		PFLU_RS19300	0.76	+2.3
4,364,340	-		PFLU_RS19300	0.76	+1.8
4,364,340	-		PFLU_RS19300	0.76	+0.2
4,364,340	-		PFLU_RS19300	0.76	-0.9
4,364,340	-		PFLU_RS19300	0.76	+0.9
4,364,340	-		PFLU_RS19300	0.76	-1.5
4,364,341	+		PFLU_RS19300	0.76	+0.7
4,364,341	+		PFLU_RS19300	0.76	+0.4
4,364,341	+		PFLU_RS19300	0.76	+1.1
4,364,341	+		PFLU_RS19300	0.76	+0.5
4,364,342	-		PFLU_RS19300	0.76	+0.2
4,364,342	-		PFLU_RS19300	0.76	-0.1
4,364,342	-		PFLU_RS19300	0.76	+1.2
4,364,532	+				-0.5
4,364,532	+				+1.2
4,364,532	+				+0.5
4,364,533	-				-1.5
4,364,533	-				+0.8
4,364,756	+		PFLU_RS19305	0.22	-1.1
4,364,757	-		PFLU_RS19305	0.22	+0.4
4,364,757	-		PFLU_RS19305	0.22	+0.1
4,364,927	+		PFLU_RS19305	0.36	-0.1
4,364,941	-		PFLU_RS19305	0.37	+0.5
4,364,941	-		PFLU_RS19305	0.37	-0.8
4,365,063	+		PFLU_RS19305	0.46	-0.7
4,365,063	+		PFLU_RS19305	0.46	-0.4
4,365,064	-		PFLU_RS19305	0.46	-1.2
4,365,237	+		PFLU_RS19305	0.60	+0.6
4,365,237	+		PFLU_RS19305	0.60	+1.5
4,365,237	+		PFLU_RS19305	0.60	-0.5
4,365,237	+		PFLU_RS19305	0.60	+1.4
4,365,238	-		PFLU_RS19305	0.60	-1.1
4,365,246	+		PFLU_RS19305	0.61	-0.4
4,365,246	+		PFLU_RS19305	0.61	-0.6
4,365,246	+		PFLU_RS19305	0.61	-1.4
4,365,246	+		PFLU_RS19305	0.61	+0.5
4,365,246	+		PFLU_RS19305	0.61	+1.8
4,365,246	+		PFLU_RS19305	0.61	+0.8
4,365,246	+		PFLU_RS19305	0.61	+1.3
4,365,246	+		PFLU_RS19305	0.61	-0.5
4,365,247	-		PFLU_RS19305	0.61	-0.6
4,365,247	-		PFLU_RS19305	0.61	-1.2
4,365,247	-		PFLU_RS19305	0.61	+0.1
4,365,248	+		PFLU_RS19305	0.61	-0.2
4,365,248	+		PFLU_RS19305	0.61	-1.0
4,365,248	+		PFLU_RS19305	0.61	-0.8
4,365,248	+		PFLU_RS19305	0.61	+1.6
4,365,248	+		PFLU_RS19305	0.61	-0.1
4,365,248	+		PFLU_RS19305	0.61	+1.5
4,365,248	+		PFLU_RS19305	0.61	+0.5
4,365,248	+		PFLU_RS19305	0.61	+0.6
4,365,248	+		PFLU_RS19305	0.61	+0.7
4,365,249	-		PFLU_RS19305	0.61	-0.2
4,365,249	-		PFLU_RS19305	0.61	-0.6
4,365,249	-		PFLU_RS19305	0.61	+2.1
4,365,249	-		PFLU_RS19305	0.61	-1.3
4,365,249	-		PFLU_RS19305	0.61	+0.2
4,365,249	-		PFLU_RS19305	0.61	-2.3
4,365,249	-		PFLU_RS19305	0.61	-0.9
4,365,249	-		PFLU_RS19305	0.61	+1.0
4,365,249	-		PFLU_RS19305	0.61	+0.2
4,365,249	-		PFLU_RS19305	0.61	-0.2
4,365,340	-		PFLU_RS19305	0.68	+0.9
4,365,408	+		PFLU_RS19305	0.73	+2.0
4,365,408	+		PFLU_RS19305	0.73	+1.0