Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09900

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
1,022,242	+		PGA1_c09880	0.83	-2.2
1,022,253	+		PGA1_c09880	0.83	+0.3
1,022,297	+		PGA1_c09880	0.85	+0.5
1,022,317	-		PGA1_c09880	0.86	-0.9
1,022,389	+		PGA1_c09880	0.89	-0.0
1,022,451	+				+0.9
1,022,456	+				-0.8
1,022,519	+				+0.9
1,022,553	+				-0.2
1,022,688	+				+0.5
1,022,688	+				+0.7
1,022,725	+				-2.2
1,022,807	-				+0.1
1,022,946	-		PGA1_c09890	0.74	+0.6
1,022,985	-				-1.0
1,023,048	-				+1.5
1,023,087	+				+1.7
1,023,087	+				+0.0
1,023,087	+				+0.9
1,023,087	+				-0.2
1,023,087	+				+0.7
1,023,087	+				+1.6
1,023,087	+				+0.5
1,023,087	+				-0.8
1,023,087	+				+1.5
1,023,087	+				-0.6
1,023,087	+				+0.2
1,023,087	+				+1.1
1,023,087	+				+0.1
1,023,087	+				+1.4
1,023,087	+				+0.2
1,023,087	+				-0.3
1,023,087	+				+0.7
1,023,087	+				-0.5
1,023,087	+				+0.6
1,023,087	+				+1.8
1,023,087	+				-0.1
1,023,087	+				+0.5
1,023,087	+				+0.4
1,023,095	+				-0.4
1,023,095	-				+0.5
1,023,095	-				+0.5
1,023,095	-				+0.0
1,023,095	-				+0.7
1,023,095	-				+1.3
1,023,095	-				+0.3
1,023,095	-				+0.8
1,023,095	-				+0.8
1,023,095	-				-0.2
1,023,095	-				-0.6
1,023,095	-				+0.2
1,023,095	-				+0.2
1,023,095	-				+0.8
1,023,095	-				+0.1
1,023,095	-				+2.5
1,023,095	-				+0.4
1,023,095	-				+0.1
1,023,095	-				-2.6
1,023,236	-				+1.5
1,023,303	+				-0.2
1,023,316	-				+0.3
1,023,345	+				-1.2
1,023,353	-				+2.1
1,023,359	+				+2.2
1,023,359	+				+0.9
1,023,359	+				+1.4
1,023,458	-		PGA1_c09900	0.11	+1.5
1,023,638	+		PGA1_c09900	0.19	+1.4
1,023,659	+		PGA1_c09900	0.20	+1.4
1,023,659	+		PGA1_c09900	0.20	+0.6
1,023,707	-		PGA1_c09900	0.22	-1.2
1,023,770	+		PGA1_c09900	0.25	+1.5
1,023,770	+		PGA1_c09900	0.25	+0.3
1,023,801	-		PGA1_c09900	0.27	-1.5
1,024,054	+		PGA1_c09900	0.38	+1.1
1,024,055	+		PGA1_c09900	0.38	+1.2
1,024,075	+		PGA1_c09900	0.39	-0.1
1,024,075	+		PGA1_c09900	0.39	+2.2
1,024,083	-		PGA1_c09900	0.40	+0.8
1,024,083	-		PGA1_c09900	0.40	+1.4
1,024,112	+		PGA1_c09900	0.41	+0.3
1,024,120	-		PGA1_c09900	0.42	+1.1
1,024,128	+		PGA1_c09900	0.42	+1.2
1,024,135	+		PGA1_c09900	0.42	+0.7
1,024,143	-		PGA1_c09900	0.43	+1.3
1,024,338	+		PGA1_c09900	0.52	+1.1
1,024,395	+		PGA1_c09900	0.54	+1.0
1,024,396	-		PGA1_c09900	0.54	+2.0
1,024,401	-		PGA1_c09900	0.55	+0.7
1,024,441	-		PGA1_c09900	0.57	+0.6
1,024,575	-		PGA1_c09900	0.63	+1.1
1,024,598	-		PGA1_c09900	0.64	+1.8
1,024,691	+		PGA1_c09900	0.68	+1.0
1,024,738	-		PGA1_c09900	0.71	+1.1
1,024,812	-		PGA1_c09900	0.74	+0.4
1,024,875	+		PGA1_c09900	0.77	+0.9
1,024,875	+		PGA1_c09900	0.77	+1.1
1,024,883	-		PGA1_c09900	0.77	+0.2
1,024,883	-		PGA1_c09900	0.77	+2.6
1,025,009	+		PGA1_c09900	0.83	-0.1
1,025,026	+		PGA1_c09900	0.84	+1.3
1,025,031	+		PGA1_c09900	0.84	+0.2
1,025,123	+		PGA1_c09900	0.89	+0.1
1,025,162	+				-1.1
1,025,193	+				+1.0
1,025,193	+				+1.4
1,025,280	-				+1.5
1,025,293	+				+0.7
1,025,301	-				+1.0
1,025,311	+				+1.3
1,025,341	+				+0.2
1,025,361	+				-0.9
1,025,393	+				+0.9
1,025,452	+				+0.9
1,025,578	+		PGA1_c09910	0.32	-1.3
1,025,586	-		PGA1_c09910	0.34	-1.3
1,025,591	-		PGA1_c09910	0.35	+0.7
1,025,591	-		PGA1_c09910	0.35	-1.4
1,025,623	-		PGA1_c09910	0.42	+0.5
1,025,623	-		PGA1_c09910	0.42	-1.3
1,025,728	-		PGA1_c09910	0.67	-0.0
1,025,808	-		PGA1_c09910	0.86	-0.1
1,025,984	+				+1.7
1,026,037	+				-1.9
1,026,053	+				-1.5
1,026,096	+				-1.1
1,026,119	+				+0.1
1,026,129	+				+0.1
1,026,142	+				-0.9
1,026,171	+		PGA1_c09920	0.11	+0.7
1,026,173	+		PGA1_c09920	0.11	+0.8
1,026,190	+		PGA1_c09920	0.13	-0.1
1,026,198	+		PGA1_c09920	0.14	+0.5
1,026,216	-		PGA1_c09920	0.16	-0.2
1,026,218	+		PGA1_c09920	0.17	-0.1
1,026,241	+		PGA1_c09920	0.20	-0.1
1,026,241	+		PGA1_c09920	0.20	+0.5
1,026,249	-		PGA1_c09920	0.21	-0.2
1,026,249	-		PGA1_c09920	0.21	+0.7