Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_78p00030
Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. 1-ethyl-3-methylimidazolium chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,156 | - | PGA1_78p00020 | 0.44 | -0.4 | |
| 2,786 | + | PGA1_78p00020 | 0.89 | +0.4 | |
| 2,929 | - | -1.6 | |||
| 3,036 | - | -1.6 | |||
| 3,564 | - | PGA1_78p00030 | 0.42 | +1.4 | |
| 3,572 | + | PGA1_78p00030 | 0.42 | +0.3 | |
| 3,815 | + | PGA1_78p00030 | 0.59 | -1.6 | |
| 3,945 | + | PGA1_78p00030 | 0.68 | -0.8 | |
| 4,144 | - | PGA1_78p00030 | 0.82 | -1.1 | |
| 4,843 | - | PGA1_78p00040 | 0.32 | +0.2 | |
| 4,865 | - | PGA1_78p00040 | 0.34 | +0.7 | |
| 4,872 | + | PGA1_78p00040 | 0.35 | +1.4 | |
| 5,324 | - | PGA1_78p00040 | 0.83 | +0.3 |
Or see this region's nucleotide sequence