Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31670

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
3,306,586	+		PGA1_c31660	0.37	-0.5
3,306,647	+		PGA1_c31660	0.42	-2.7
3,306,756	-		PGA1_c31660	0.51	-0.5
3,306,766	-		PGA1_c31660	0.52	-0.5
3,306,821	+		PGA1_c31660	0.56	+0.1
3,306,919	-		PGA1_c31660	0.64	+1.5
3,307,002	+		PGA1_c31660	0.71	+0.1
3,307,010	-		PGA1_c31660	0.72	-0.1
3,307,017	-		PGA1_c31660	0.72	-0.2
3,307,017	-		PGA1_c31660	0.72	-0.7
3,307,023	-		PGA1_c31660	0.73	-0.3
3,307,096	-		PGA1_c31660	0.79	+1.0
3,307,106	+		PGA1_c31660	0.79	-0.9
3,307,111	+		PGA1_c31660	0.80	-1.5
3,307,111	+		PGA1_c31660	0.80	+0.8
3,307,119	-		PGA1_c31660	0.80	-0.0
3,307,119	-		PGA1_c31660	0.80	-0.4
3,307,119	-		PGA1_c31660	0.80	-0.5
3,307,129	-		PGA1_c31660	0.81	-1.1
3,307,129	-		PGA1_c31660	0.81	+1.1
3,307,129	-		PGA1_c31660	0.81	-0.6
3,307,129	-		PGA1_c31660	0.81	+0.1
3,307,195	-		PGA1_c31660	0.86	+0.9
3,307,205	-		PGA1_c31660	0.87	-2.5
3,307,241	-				-0.3
3,307,272	+				-0.9
3,307,272	+				-0.4
3,307,290	+				+0.7
3,307,290	+				-0.1
3,307,290	+				-2.5
3,307,298	-				-0.6
3,307,298	-				-0.1
3,307,298	-				+1.5
3,307,334	+				-0.2
3,307,337	-				+0.4
3,307,355	-				-0.9
3,307,360	-				+0.4
3,307,365	-				+1.2
3,307,365	-				+0.3
3,307,365	-				-0.6
3,307,365	-				-0.3
3,307,365	-				+0.5
3,307,395	+				-0.6
3,307,403	-				-1.1
3,307,419	-				-1.9
3,307,465	+				+0.3
3,307,479	-				-0.5
3,307,491	+				+0.0
3,307,499	-				+1.0
3,307,499	-				-1.8
3,307,524	+				+0.7
3,307,524	+				+1.9
3,307,524	+				-1.6
3,307,557	-				+1.0
3,307,569	+				-1.0
3,307,569	+				-1.8
3,307,569	+				+0.9
3,307,569	+				-0.0
3,307,569	+				-2.3
3,307,569	+				+0.3
3,307,569	+				+0.3
3,307,569	+				+3.3
3,307,577	-				+0.5
3,307,577	-				+1.2
3,307,577	-				+0.0
3,307,747	+		PGA1_c31670	0.15	-1.8
3,307,771	-		PGA1_c31670	0.17	-2.8
3,307,905	+		PGA1_c31670	0.30	-0.9
3,307,913	-		PGA1_c31670	0.31	-0.0
3,308,086	+		PGA1_c31670	0.47	-0.0
3,308,217	-		PGA1_c31670	0.59	-0.1
3,308,448	+		PGA1_c31670	0.80	-0.5
3,308,512	+		PGA1_c31670	0.86	+0.2
3,308,525	-		PGA1_c31670	0.88	-0.5
3,308,570	+				-0.6
3,308,615	-				-0.6
3,308,635	+				-2.0
3,308,635	+				-3.2
3,308,643	-				-1.9
3,308,643	-				-1.7
3,308,645	+				+0.6
3,308,650	+				-0.5
3,308,653	-				+1.4
3,308,659	-				+0.0
3,308,719	+				-0.1
3,308,775	+				-2.6
3,308,801	+				-1.0
3,308,809	-				-0.7