Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30350

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
3,170,641	+				+0.8
3,170,641	+				-0.8
3,170,689	+				-0.2
3,170,689	+				-0.3
3,170,697	-				-1.3
3,170,763	-				+0.4
3,170,770	+				-0.7
3,170,778	-				+0.8
3,170,778	-				-1.3
3,170,778	-				+0.5
3,170,866	-		PGA1_c30340	0.18	-0.2
3,170,881	+		PGA1_c30340	0.20	+1.0
3,170,944	+		PGA1_c30340	0.27	+0.1
3,170,957	-		PGA1_c30340	0.29	-1.4
3,171,003	+		PGA1_c30340	0.34	+0.4
3,171,003	+		PGA1_c30340	0.34	+0.1
3,171,011	-		PGA1_c30340	0.35	-0.0
3,171,020	+		PGA1_c30340	0.36	-0.9
3,171,020	+		PGA1_c30340	0.36	-0.1
3,171,020	+		PGA1_c30340	0.36	-0.4
3,171,020	+		PGA1_c30340	0.36	-1.3
3,171,020	+		PGA1_c30340	0.36	-0.9
3,171,020	+		PGA1_c30340	0.36	+0.4
3,171,020	+		PGA1_c30340	0.36	-0.8
3,171,028	-		PGA1_c30340	0.37	+0.1
3,171,028	-		PGA1_c30340	0.37	-0.3
3,171,028	-		PGA1_c30340	0.37	-0.9
3,171,037	+		PGA1_c30340	0.38	+0.7
3,171,045	-		PGA1_c30340	0.39	+1.0
3,171,045	-		PGA1_c30340	0.39	+0.7
3,171,100	+		PGA1_c30340	0.45	+0.2
3,171,108	-		PGA1_c30340	0.46	-1.9
3,171,108	-		PGA1_c30340	0.46	+0.7
3,171,116	-		PGA1_c30340	0.47	+1.7
3,171,211	+		PGA1_c30340	0.58	-0.3
3,171,211	+		PGA1_c30340	0.58	-0.3
3,171,217	+		PGA1_c30340	0.59	+2.4
3,171,225	-		PGA1_c30340	0.60	+0.6
3,171,285	+		PGA1_c30340	0.67	-0.5
3,171,309	-		PGA1_c30340	0.70	+1.0
3,171,323	-		PGA1_c30340	0.71	+0.5
3,171,323	-		PGA1_c30340	0.71	+1.7
3,171,337	+		PGA1_c30340	0.73	-2.7
3,171,371	-		PGA1_c30340	0.77	-0.2
3,171,436	-		PGA1_c30340	0.84	+0.0
3,171,473	+		PGA1_c30340	0.89	-0.2
3,171,593	+				-0.5
3,171,601	-				-0.7
3,171,625	-				-0.5
3,171,676	-				-0.2
3,171,705	+				+0.4
3,171,720	-		PGA1_c30350	0.10	+0.5
3,171,720	-		PGA1_c30350	0.10	-0.9
3,171,819	+		PGA1_c30350	0.20	+0.1
3,171,819	+		PGA1_c30350	0.20	+1.6
3,171,819	+		PGA1_c30350	0.20	+0.5
3,171,873	-		PGA1_c30350	0.26	-0.8
3,171,956	+		PGA1_c30350	0.34	-0.1
3,171,997	+		PGA1_c30350	0.38	+0.7
3,171,999	+		PGA1_c30350	0.38	-0.2
3,172,005	-		PGA1_c30350	0.39	+1.2
3,172,046	+		PGA1_c30350	0.43	-1.5
3,172,053	+		PGA1_c30350	0.44	-0.9
3,172,061	-		PGA1_c30350	0.45	+0.7
3,172,061	-		PGA1_c30350	0.45	-0.0
3,172,061	-		PGA1_c30350	0.45	+0.8
3,172,067	+		PGA1_c30350	0.45	+0.5
3,172,209	+		PGA1_c30350	0.59	-1.2
3,172,231	+		PGA1_c30350	0.62	+1.2
3,172,244	-		PGA1_c30350	0.63	+1.2
3,172,267	+		PGA1_c30350	0.65	+0.1
3,172,319	-		PGA1_c30350	0.70	-0.1
3,172,321	+		PGA1_c30350	0.71	-0.8
3,172,335	+		PGA1_c30350	0.72	+0.1
3,172,336	-		PGA1_c30350	0.72	+0.3
3,172,343	-		PGA1_c30350	0.73	+0.3
3,172,374	+		PGA1_c30350	0.76	+0.8
3,172,523	-				+0.4
3,172,523	-				-0.0
3,172,539	+				-0.8
3,172,549	+				-0.7
3,172,554	+				-0.8
3,172,554	+				+0.6
3,172,560	+				+0.3
3,172,567	-				+0.7
3,172,657	+				-0.3
3,172,658	+				+0.3
3,172,665	-				+0.7
3,172,701	+				-2.4
3,172,709	-				+0.2
3,172,797	+		PGA1_c30360	0.13	-0.9
3,172,805	-		PGA1_c30360	0.14	+0.4
3,172,805	-		PGA1_c30360	0.14	-0.4
3,172,809	+		PGA1_c30360	0.15	+1.1
3,172,817	-		PGA1_c30360	0.16	-1.5
3,172,822	-		PGA1_c30360	0.16	+0.5
3,172,827	-		PGA1_c30360	0.17	-0.8
3,172,877	+		PGA1_c30360	0.24	-1.9
3,172,904	+		PGA1_c30360	0.28	+0.5
3,172,912	-		PGA1_c30360	0.29	+0.2
3,172,935	+		PGA1_c30360	0.32	-0.8
3,172,935	+		PGA1_c30360	0.32	-0.6
3,172,943	-		PGA1_c30360	0.33	-0.0
3,172,981	+		PGA1_c30360	0.38	+0.5
3,172,989	-		PGA1_c30360	0.40	-1.9
3,172,989	-		PGA1_c30360	0.40	-0.3
3,173,030	+		PGA1_c30360	0.45	-0.3
3,173,035	+		PGA1_c30360	0.46	-0.5
3,173,094	+		PGA1_c30360	0.54	-1.2
3,173,102	-		PGA1_c30360	0.55	-0.9
3,173,131	-		PGA1_c30360	0.59	+0.8
3,173,166	+		PGA1_c30360	0.64	+1.3
3,173,169	-		PGA1_c30360	0.64	+0.0
3,173,174	-		PGA1_c30360	0.65	-0.8
3,173,174	-		PGA1_c30360	0.65	-1.0
3,173,174	-		PGA1_c30360	0.65	-0.2
3,173,193	+		PGA1_c30360	0.68	+0.4
3,173,193	+		PGA1_c30360	0.68	-0.2
3,173,247	+		PGA1_c30360	0.75	-0.1
3,173,249	-		PGA1_c30360	0.76	+0.4
3,173,282	-		PGA1_c30360	0.80	-0.9
3,173,390	-				-0.7
3,173,390	-				-0.9
3,173,401	+				-0.2
3,173,401	+				+0.2
3,173,434	-				+0.5
3,173,448	+				+1.2
3,173,459	+				-1.0
3,173,459	+				+0.2
3,173,462	-				+0.2
3,173,467	-				+0.9
3,173,467	-				+1.7
3,173,471	-				+0.3
3,173,481	-				+1.2
3,173,540	-				+0.7
3,173,540	-				+0.5
3,173,541	-				-1.5
3,173,541	-				+0.6
3,173,541	-				-0.1
3,173,576	+				-0.3
3,173,584	-				-1.2