Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24200

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
2,524,121	+		PGA1_c24190	0.70	-2.0
2,524,121	+		PGA1_c24190	0.70	-0.1
2,524,121	+		PGA1_c24190	0.70	+0.5
2,524,126	-		PGA1_c24190	0.71	-0.5
2,524,129	-		PGA1_c24190	0.71	-0.2
2,524,134	-		PGA1_c24190	0.71	-0.9
2,524,152	+		PGA1_c24190	0.72	-0.3
2,524,152	+		PGA1_c24190	0.72	-2.9
2,524,177	-		PGA1_c24190	0.73	+0.5
2,524,187	-		PGA1_c24190	0.73	+0.3
2,524,226	-		PGA1_c24190	0.75	+0.4
2,524,228	-		PGA1_c24190	0.75	-1.0
2,524,251	-		PGA1_c24190	0.76	-2.0
2,524,298	-		PGA1_c24190	0.78	+0.7
2,524,298	-		PGA1_c24190	0.78	-1.2
2,524,315	-		PGA1_c24190	0.78	-1.8
2,524,507	+		PGA1_c24190	0.86	+0.1
2,524,507	+		PGA1_c24190	0.86	+0.8
2,524,515	-		PGA1_c24190	0.86	-0.3
2,524,544	-		PGA1_c24190	0.87	+1.2
2,524,590	-		PGA1_c24190	0.89	-0.1
2,524,637	+				-2.4
2,524,700	-				-1.3
2,524,724	+				+0.3
2,524,732	-				+1.1
2,524,762	+				+0.3
2,524,770	-				-0.1
2,524,800	+				+1.5
2,524,800	+				-0.5
2,524,805	+				+0.7
2,524,805	+				-0.1
2,524,808	-				-0.0
2,524,868	-				+0.5
2,524,935	+				+0.0
2,524,943	-				-0.1
2,524,944	+				+1.5
2,525,024	+				+0.2
2,525,087	+				-0.8
2,525,146	+		PGA1_c24200	0.23	-3.0
2,525,211	-		PGA1_c24200	0.37	-0.5
2,525,226	-		PGA1_c24200	0.40	+0.8
2,525,253	+		PGA1_c24200	0.46	-2.0
2,525,299	+		PGA1_c24200	0.56	-1.4
2,525,370	-		PGA1_c24200	0.71	+0.1
2,525,400	+		PGA1_c24200	0.78	-1.4
2,525,400	+		PGA1_c24200	0.78	-1.2
2,525,400	+		PGA1_c24200	0.78	-0.4
2,525,400	+		PGA1_c24200	0.78	+0.5
2,525,400	+		PGA1_c24200	0.78	-1.4
2,525,400	+		PGA1_c24200	0.78	-2.1
2,525,400	+		PGA1_c24200	0.78	-1.8
2,525,408	-		PGA1_c24200	0.80	+0.7
2,525,408	-		PGA1_c24200	0.80	-1.1
2,525,410	+		PGA1_c24200	0.80	-0.7
2,525,431	-		PGA1_c24200	0.85	-0.2
2,525,453	+		PGA1_c24200	0.90	-0.3
2,525,713	+				+0.5
2,525,716	-				+0.3
2,525,845	+		PGA1_c24210	0.17	+0.2
2,525,853	-		PGA1_c24210	0.18	-1.7
2,525,878	+		PGA1_c24210	0.19	+1.3
2,525,878	+		PGA1_c24210	0.19	+0.1
2,525,886	-		PGA1_c24210	0.20	-0.2
2,526,101	+		PGA1_c24210	0.34	-2.7
2,526,341	-		PGA1_c24210	0.51	+0.5
2,526,361	-		PGA1_c24210	0.52	-0.7
2,526,402	+		PGA1_c24210	0.55	-0.0
2,526,402	-		PGA1_c24210	0.55	-1.1
2,526,405	-		PGA1_c24210	0.55	-0.6
2,526,429	-		PGA1_c24210	0.57	-0.3
2,526,445	+		PGA1_c24210	0.58	-0.5
2,526,445	+		PGA1_c24210	0.58	+0.9
2,526,465	-		PGA1_c24210	0.59	+0.8