Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21530
Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. 1-ethyl-3-methylimidazolium chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,231,051 | - | -0.4 | |||
| 2,231,051 | - | +0.8 | |||
| 2,231,056 | - | +0.0 | |||
| 2,231,056 | - | -0.6 | |||
| 2,231,098 | + | -0.8 | |||
| 2,231,098 | + | +0.9 | |||
| 2,231,098 | + | -0.1 | |||
| 2,231,098 | + | +1.4 | |||
| 2,231,106 | - | +0.2 | |||
| 2,231,188 | + | +1.2 | |||
| 2,231,196 | - | -0.1 | |||
| 2,231,766 | + | PGA1_c21525 | 0.86 | +1.3 | |
| 2,232,081 | - | PGA1_c21530 | 0.27 | -0.3 | |
| 2,232,154 | - | PGA1_c21530 | 0.41 | +0.2 | |
| 2,232,198 | + | PGA1_c21530 | 0.49 | -0.6 | |
| 2,232,206 | - | PGA1_c21530 | 0.51 | -1.2 |
Or see this region's nucleotide sequence