Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20260

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
2,100,945	-		PGA1_c20240	0.84	-0.5
2,100,947	-		PGA1_c20240	0.84	+0.0
2,100,981	-		PGA1_c20240	0.88	+0.7
2,100,983	-		PGA1_c20240	0.89	+0.1
2,100,997	+				-0.4
2,101,030	+				-1.4
2,101,038	-				+0.4
2,101,072	-				+0.2
2,101,090	+				-1.1
2,101,098	-				+0.3
2,101,145	+				+1.0
2,101,216	+		PGA1_c20250	0.16	-0.5
2,101,369	+		PGA1_c20250	0.36	-0.8
2,101,376	-		PGA1_c20250	0.37	+1.2
2,101,447	+		PGA1_c20250	0.46	+0.9
2,101,447	+		PGA1_c20250	0.46	+1.6
2,101,483	+		PGA1_c20250	0.51	+0.5
2,101,493	+		PGA1_c20250	0.52	-0.6
2,101,644	-		PGA1_c20250	0.72	+0.4
2,101,701	+		PGA1_c20250	0.79	-0.3
2,101,799	-				-0.9
2,101,870	+				-0.9
2,101,892	+				+0.5
2,101,940	-				-0.4
2,102,041	-		PGA1_c20260	0.11	-0.4
2,102,100	-		PGA1_c20260	0.15	+0.7
2,102,145	-		PGA1_c20260	0.18	+0.6
2,102,171	+		PGA1_c20260	0.20	+1.0
2,102,171	+		PGA1_c20260	0.20	-1.5
2,102,256	-		PGA1_c20260	0.26	-0.2
2,102,281	+		PGA1_c20260	0.28	+0.7
2,102,480	+		PGA1_c20260	0.42	-0.2
2,102,525	-		PGA1_c20260	0.45	+0.7
2,102,770	+		PGA1_c20260	0.62	+1.0
2,102,776	-		PGA1_c20260	0.62	+1.2
2,102,776	-		PGA1_c20260	0.62	+1.4
2,102,873	-		PGA1_c20260	0.69	-0.7
2,102,914	+		PGA1_c20260	0.72	+0.4
2,102,916	-		PGA1_c20260	0.72	+0.6
2,102,941	+		PGA1_c20260	0.74	+0.8
2,102,949	+		PGA1_c20260	0.75	+1.1
2,102,957	-		PGA1_c20260	0.75	-0.1
2,103,047	-		PGA1_c20260	0.81	-0.3
2,103,051	-		PGA1_c20260	0.82	-1.3
2,103,129	-		PGA1_c20260	0.87	+0.0
2,103,228	+				+1.4
2,103,236	-				-0.3
2,103,249	-				-0.3
2,103,320	+				-0.0
2,103,330	+				+0.8
2,103,330	+				+1.4
2,103,330	+				+0.8
2,103,330	+				+0.4
2,103,338	-				-0.2
2,103,338	-				-0.5
2,103,338	-				+0.9
2,103,430	+				-0.2