Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15310

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
1,595,505	-		PGA1_c15300	0.61	-2.3
1,595,523	+		PGA1_c15300	0.62	-1.2
1,595,523	+		PGA1_c15300	0.62	+1.4
1,595,531	-		PGA1_c15300	0.62	+0.6
1,595,737	-		PGA1_c15300	0.73	-1.5
1,595,739	-		PGA1_c15300	0.74	-0.2
1,596,019	-		PGA1_c15300	0.89	+0.0
1,596,123	-				+1.0
1,596,221	-				+0.3
1,596,316	+				-1.8
1,596,316	+				-1.0
1,596,319	-				-0.5
1,596,352	+				-2.5
1,596,352	+				-0.6
1,596,352	+				+0.6
1,596,358	-				-0.2
1,596,358	-				-0.2
1,596,360	-				+0.0
1,596,381	-				-1.2
1,596,383	-				-1.8
1,596,431	+		PGA1_c15310	0.19	-1.4
1,596,537	+		PGA1_c15310	0.50	-1.7
1,596,577	+		PGA1_c15310	0.62	-1.6
1,596,585	-		PGA1_c15310	0.65	-2.6
1,596,607	+		PGA1_c15310	0.71	-2.0
1,596,615	-		PGA1_c15310	0.74	-1.1
1,596,682	+				-1.5
1,596,704	+				-1.5
1,596,704	+				-0.1
1,596,712	-				-1.2
1,596,712	-				+0.9
1,596,762	+				-2.5
1,596,770	-				-1.1
1,596,815	+				-1.5
1,596,975	-		PGA1_c15320	0.18	-2.2
1,597,095	+		PGA1_c15320	0.28	-0.8
1,597,156	+		PGA1_c15320	0.33	-1.5
1,597,164	-		PGA1_c15320	0.34	-1.9
1,597,197	+		PGA1_c15320	0.37	-1.3
1,597,197	+		PGA1_c15320	0.37	-1.6
1,597,200	-		PGA1_c15320	0.37	+0.0
1,597,205	-		PGA1_c15320	0.38	-3.1
1,597,321	+		PGA1_c15320	0.47	-2.6
1,597,368	+		PGA1_c15320	0.51	-2.2
1,597,391	+		PGA1_c15320	0.53	-0.2
1,597,398	+		PGA1_c15320	0.54	-0.2
1,597,399	-		PGA1_c15320	0.54	-1.8
1,597,437	+		PGA1_c15320	0.57	-1.0
1,597,437	+		PGA1_c15320	0.57	-2.2
1,597,437	+		PGA1_c15320	0.57	-0.8
1,597,445	-		PGA1_c15320	0.58	-2.1
1,597,535	-		PGA1_c15320	0.66	-3.0