Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13590

Experiment: m.b. 1-ethyl-3-methylimidazolium chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium chloride 5 mM
1,403,482	+		PGA1_c13580	0.17	-0.3
1,403,490	-		PGA1_c13580	0.18	-0.9
1,403,629	+		PGA1_c13580	0.30	-1.8
1,403,682	+		PGA1_c13580	0.35	-0.4
1,403,682	+		PGA1_c13580	0.35	+0.6
1,403,682	+		PGA1_c13580	0.35	-0.2
1,403,682	+		PGA1_c13580	0.35	+0.6
1,403,685	-		PGA1_c13580	0.35	-1.8
1,403,690	-		PGA1_c13580	0.35	-1.5
1,403,690	-		PGA1_c13580	0.35	-0.9
1,403,896	-		PGA1_c13580	0.54	-0.8
1,403,967	-		PGA1_c13580	0.60	-1.8
1,403,970	+		PGA1_c13580	0.60	-0.5
1,403,978	-		PGA1_c13580	0.61	+0.5
1,404,039	+		PGA1_c13580	0.66	-1.4
1,404,083	+		PGA1_c13580	0.70	-1.9
1,404,083	+		PGA1_c13580	0.70	-0.6
1,404,126	-		PGA1_c13580	0.74	-0.2
1,404,155	+		PGA1_c13580	0.76	-2.3
1,404,235	+		PGA1_c13580	0.83	-0.9
1,404,239	+		PGA1_c13580	0.84	-0.5
1,404,401	+				-1.2
1,404,401	+				-0.3
1,404,409	-				-0.0
1,404,415	-				-0.6
1,404,433	+				-0.3
1,404,433	+				-2.3
1,404,433	+				-1.2
1,404,433	+				-2.2
1,404,441	-				-0.0
1,404,441	-				-0.9
1,404,445	+				-1.4
1,404,453	-				-0.6
1,404,453	-				-1.5
1,404,503	+				-3.3
1,404,541	+		PGA1_c13590	0.13	+0.2
1,404,549	-		PGA1_c13590	0.14	-2.3
1,404,550	-		PGA1_c13590	0.14	-0.4
1,404,551	-		PGA1_c13590	0.14	-1.6
1,404,555	+		PGA1_c13590	0.15	-0.6
1,404,588	-		PGA1_c13590	0.19	-2.3
1,404,719	+		PGA1_c13590	0.38	-2.9
1,404,719	+		PGA1_c13590	0.38	-1.9
1,404,727	-		PGA1_c13590	0.39	-1.4
1,404,875	-		PGA1_c13590	0.60	-0.7
1,404,905	-		PGA1_c13590	0.64	-0.9
1,404,966	-		PGA1_c13590	0.73	-1.7
1,405,014	-		PGA1_c13590	0.80	-2.5
1,405,021	+		PGA1_c13590	0.81	-1.1
1,405,021	+		PGA1_c13590	0.81	+0.2
1,405,337	+		PGA1_c13600	0.16	-2.1
1,406,030	+		PGA1_c13600	0.77	-0.2
1,406,088	-		PGA1_c13600	0.82	-1.2