Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34750

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 20 mM
3,645,401	-				+0.1
3,645,456	-				+0.8
3,645,465	+				-0.3
3,645,486	-				-0.6
3,645,489	-				+0.9
3,645,496	-				-0.9
3,645,501	+				-0.4
3,645,512	-				+0.9
3,645,580	-				-0.4
3,645,587	+				-0.7
3,645,595	-				-2.0
3,645,620	+				+0.5
3,645,763	+		PGA1_c34750	0.10	+0.2
3,645,765	-		PGA1_c34750	0.10	-0.3
3,645,770	-		PGA1_c34750	0.10	+1.5
3,645,776	+		PGA1_c34750	0.11	+0.3
3,645,831	-		PGA1_c34750	0.12	+0.4
3,645,831	-		PGA1_c34750	0.12	-1.5
3,645,892	+		PGA1_c34750	0.14	+0.8
3,645,906	+		PGA1_c34750	0.15	+0.6
3,645,925	+		PGA1_c34750	0.16	+1.0
3,645,951	+		PGA1_c34750	0.16	+1.2
3,645,996	-		PGA1_c34750	0.18	+0.3
3,646,160	+		PGA1_c34750	0.23	+0.6
3,646,241	-		PGA1_c34750	0.26	+0.1
3,646,248	-		PGA1_c34750	0.26	-1.1
3,646,258	-		PGA1_c34750	0.27	+0.4
3,646,282	-		PGA1_c34750	0.27	-1.1
3,646,304	-		PGA1_c34750	0.28	-1.2
3,646,352	+		PGA1_c34750	0.30	+1.6
3,646,352	+		PGA1_c34750	0.30	-1.2
3,646,352	+		PGA1_c34750	0.30	-1.5
3,646,357	+		PGA1_c34750	0.30	+1.1
3,646,360	-		PGA1_c34750	0.30	+0.3
3,646,365	+		PGA1_c34750	0.30	-0.7
3,646,375	-		PGA1_c34750	0.30	+1.3
3,646,426	+		PGA1_c34750	0.32	-0.2
3,646,436	-		PGA1_c34750	0.32	-2.2
3,646,454	+		PGA1_c34750	0.33	+0.0
3,646,574	+		PGA1_c34750	0.37	-1.9
3,646,620	+		PGA1_c34750	0.38	+0.7
3,646,694	+		PGA1_c34750	0.41	+0.4
3,646,699	+		PGA1_c34750	0.41	+0.4
3,646,699	+		PGA1_c34750	0.41	+1.3
3,646,704	+		PGA1_c34750	0.41	+0.1
3,646,704	+		PGA1_c34750	0.41	-0.4
3,646,704	+		PGA1_c34750	0.41	-0.2
3,646,704	+		PGA1_c34750	0.41	-0.7
3,646,704	+		PGA1_c34750	0.41	+0.8
3,646,704	+		PGA1_c34750	0.41	+0.0
3,646,704	+		PGA1_c34750	0.41	+0.4
3,646,707	-		PGA1_c34750	0.41	+0.7
3,646,712	-		PGA1_c34750	0.42	+0.4
3,646,712	-		PGA1_c34750	0.42	-0.1
3,646,712	-		PGA1_c34750	0.42	+0.7
3,646,712	-		PGA1_c34750	0.42	-0.4
3,646,712	-		PGA1_c34750	0.42	+1.2
3,646,712	-		PGA1_c34750	0.42	+2.0
3,646,725	+		PGA1_c34750	0.42	+0.8
3,646,821	-		PGA1_c34750	0.45	-2.1
3,646,837	+		PGA1_c34750	0.46	+1.8
3,646,929	-		PGA1_c34750	0.49	-0.5
3,646,940	-		PGA1_c34750	0.49	+0.1
3,646,954	+		PGA1_c34750	0.50	-0.6
3,647,063	-		PGA1_c34750	0.53	+1.9
3,647,073	+		PGA1_c34750	0.53	+0.0
3,647,081	-		PGA1_c34750	0.54	-0.4
3,647,087	+		PGA1_c34750	0.54	-0.8
3,647,096	-		PGA1_c34750	0.54	-0.3
3,647,118	+		PGA1_c34750	0.55	+0.1
3,647,160	-		PGA1_c34750	0.56	+0.4
3,647,206	+		PGA1_c34750	0.58	-0.3
3,647,214	-		PGA1_c34750	0.58	-1.0
3,647,250	+		PGA1_c34750	0.59	+0.6
3,647,263	+		PGA1_c34750	0.60	-0.2
3,647,290	-		PGA1_c34750	0.61	-1.7
3,647,305	+		PGA1_c34750	0.61	-1.2
3,647,349	+		PGA1_c34750	0.63	+0.1
3,647,355	-		PGA1_c34750	0.63	+1.3
3,647,357	-		PGA1_c34750	0.63	-0.3
3,647,361	-		PGA1_c34750	0.63	+1.8
3,647,409	+		PGA1_c34750	0.65	-0.8
3,647,409	+		PGA1_c34750	0.65	+1.8
3,647,423	+		PGA1_c34750	0.65	+0.9
3,647,425	-		PGA1_c34750	0.65	+0.7
3,647,530	+		PGA1_c34750	0.69	-0.1
3,647,530	+		PGA1_c34750	0.69	+0.3
3,647,571	+		PGA1_c34750	0.70	+0.7
3,647,576	+		PGA1_c34750	0.70	+1.5
3,647,584	-		PGA1_c34750	0.70	-0.6
3,647,651	+		PGA1_c34750	0.73	-1.3
3,647,653	+		PGA1_c34750	0.73	+0.2
3,647,654	-		PGA1_c34750	0.73	+0.5
3,647,659	-		PGA1_c34750	0.73	+0.9
3,647,919	+		PGA1_c34750	0.81	+0.7
3,647,929	+		PGA1_c34750	0.82	-0.4
3,647,929	+		PGA1_c34750	0.82	+0.2
3,647,984	-		PGA1_c34750	0.83	+0.7
3,647,998	-		PGA1_c34750	0.84	+0.6
3,648,008	-		PGA1_c34750	0.84	-1.6
3,648,018	+		PGA1_c34750	0.85	+1.1
3,648,024	+		PGA1_c34750	0.85	+0.8
3,648,024	+		PGA1_c34750	0.85	-0.4
3,648,024	+		PGA1_c34750	0.85	+1.0
3,648,024	+		PGA1_c34750	0.85	-0.2
3,648,024	+		PGA1_c34750	0.85	-1.2
3,648,032	-		PGA1_c34750	0.85	+1.6
3,648,032	-		PGA1_c34750	0.85	-1.2
3,648,032	-		PGA1_c34750	0.85	-0.9
3,648,039	+		PGA1_c34750	0.85	-1.2
3,648,052	-		PGA1_c34750	0.86	+1.1
3,648,070	+		PGA1_c34750	0.86	-0.2
3,648,073	-		PGA1_c34750	0.86	-0.1
3,648,104	+		PGA1_c34750	0.87	+0.6
3,648,104	+		PGA1_c34750	0.87	+0.4
3,648,104	+		PGA1_c34750	0.87	+1.8
3,648,104	+		PGA1_c34750	0.87	+1.6
3,648,104	+		PGA1_c34750	0.87	+0.5
3,648,104	+		PGA1_c34750	0.87	-1.1
3,648,104	+		PGA1_c34750	0.87	-0.8
3,648,104	+		PGA1_c34750	0.87	-1.3
3,648,104	+		PGA1_c34750	0.87	+0.1
3,648,104	+		PGA1_c34750	0.87	-0.4
3,648,104	+		PGA1_c34750	0.87	+0.9
3,648,104	+		PGA1_c34750	0.87	-1.0
3,648,104	+		PGA1_c34750	0.87	+2.0
3,648,112	-		PGA1_c34750	0.88	-0.2
3,648,112	-		PGA1_c34750	0.88	-1.2
3,648,112	-		PGA1_c34750	0.88	-0.4
3,648,112	-		PGA1_c34750	0.88	-0.2
3,648,112	-		PGA1_c34750	0.88	+0.9
3,648,112	-		PGA1_c34750	0.88	-0.4
3,648,112	-		PGA1_c34750	0.88	-1.2
3,648,112	-		PGA1_c34750	0.88	+0.4
3,648,112	-		PGA1_c34750	0.88	-0.9
3,648,112	-		PGA1_c34750	0.88	+0.7
3,648,112	-		PGA1_c34750	0.88	+0.7
3,648,112	-		PGA1_c34750	0.88	-0.7
3,648,112	-		PGA1_c34750	0.88	-0.3
3,648,112	-		PGA1_c34750	0.88	+0.3
3,648,117	-		PGA1_c34750	0.88	-0.1
3,648,117	-		PGA1_c34750	0.88	+0.5
3,648,117	-		PGA1_c34750	0.88	+2.5
3,648,117	-		PGA1_c34750	0.88	-1.0
3,648,117	-		PGA1_c34750	0.88	+0.8
3,648,128	+		PGA1_c34750	0.88	-0.5
3,648,128	+		PGA1_c34750	0.88	-1.2
3,648,128	+		PGA1_c34750	0.88	-0.0
3,648,196	-				+0.5
3,648,254	+				-2.5
3,648,272	+				-0.7
3,648,304	-				+0.1
3,648,304	-				+0.4
3,648,304	-				+2.7
3,648,312	+				+1.1
3,648,469	-				+0.6
3,648,492	+				+1.6
3,648,512	-				-0.3
3,648,924	+				-0.1
3,648,981	+		PGA1_c34770	0.11	+0.5
3,648,981	+		PGA1_c34770	0.11	-3.3
3,648,981	+		PGA1_c34770	0.11	-1.0
3,648,993	+		PGA1_c34770	0.12	-0.2
3,649,001	-		PGA1_c34770	0.14	+0.1
3,649,007	+		PGA1_c34770	0.15	+2.1
3,649,024	+		PGA1_c34770	0.17	+0.7
3,649,024	+		PGA1_c34770	0.17	-0.5
3,649,032	-		PGA1_c34770	0.19	+0.5
3,649,034	-		PGA1_c34770	0.19	+0.2
3,649,105	+		PGA1_c34770	0.30	-0.2
3,649,105	+		PGA1_c34770	0.30	-1.2
3,649,105	+		PGA1_c34770	0.30	+0.5
3,649,113	-		PGA1_c34770	0.31	+0.3
3,649,131	-		PGA1_c34770	0.34	+0.1
3,649,159	+		PGA1_c34770	0.38	+0.8
3,649,161	-		PGA1_c34770	0.39	-0.6
3,649,161	-		PGA1_c34770	0.39	-0.8
3,649,167	-		PGA1_c34770	0.40	+0.0
3,649,199	+		PGA1_c34770	0.45	-0.7
3,649,224	+		PGA1_c34770	0.48	+0.8
3,649,260	+		PGA1_c34770	0.54	-0.8
3,649,278	+		PGA1_c34770	0.57	+1.3
3,649,286	-		PGA1_c34770	0.58	+0.5
3,649,297	+		PGA1_c34770	0.60	+0.6
3,649,300	-		PGA1_c34770	0.60	+0.2
3,649,302	+		PGA1_c34770	0.61	+0.1
3,649,337	+		PGA1_c34770	0.66	+0.7
3,649,444	-		PGA1_c34770	0.83	-0.1
3,649,480	-		PGA1_c34770	0.88	-0.5