Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31380

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 20 mM
3,278,393	-		PGA1_c31360	0.55	+0.2
3,278,393	-		PGA1_c31360	0.55	-0.5
3,278,393	-		PGA1_c31360	0.55	-0.7
3,278,434	+		PGA1_c31360	0.58	-0.4
3,278,462	-		PGA1_c31360	0.60	-0.1
3,278,462	-		PGA1_c31360	0.60	-0.2
3,278,481	-		PGA1_c31360	0.62	-0.3
3,278,552	-		PGA1_c31360	0.67	-0.2
3,278,564	-		PGA1_c31360	0.68	-0.0
3,278,613	-		PGA1_c31360	0.72	-0.4
3,278,620	-		PGA1_c31360	0.73	-0.4
3,278,649	-		PGA1_c31360	0.75	-0.9
3,278,649	-		PGA1_c31360	0.75	-0.1
3,278,649	-		PGA1_c31360	0.75	-2.4
3,278,649	-		PGA1_c31360	0.75	+0.8
3,278,652	-		PGA1_c31360	0.75	+0.3
3,278,652	-		PGA1_c31360	0.75	-0.4
3,278,652	-		PGA1_c31360	0.75	+0.4
3,278,708	+		PGA1_c31360	0.79	+0.7
3,278,724	+		PGA1_c31360	0.81	-1.4
3,278,740	-		PGA1_c31360	0.82	+0.1
3,278,740	-		PGA1_c31360	0.82	+0.9
3,278,819	+		PGA1_c31360	0.88	-0.5
3,278,870	+				-0.5
3,278,878	-				-0.1
3,278,880	+				+2.0
3,278,959	+				+1.5
3,278,964	+				-1.1
3,278,967	-				-0.4
3,278,969	+				+1.2
3,278,972	-				+0.5
3,279,003	-				+0.0
3,279,037	-		PGA1_c31370	0.13	-0.0
3,279,056	-		PGA1_c31370	0.17	+0.1
3,279,056	-		PGA1_c31370	0.17	-0.4
3,279,056	-		PGA1_c31370	0.17	+0.1
3,279,069	+		PGA1_c31370	0.20	+0.3
3,279,077	-		PGA1_c31370	0.22	-0.8
3,279,149	+		PGA1_c31370	0.39	-0.2
3,279,149	+		PGA1_c31370	0.39	-1.1
3,279,156	-		PGA1_c31370	0.40	+0.6
3,279,157	-		PGA1_c31370	0.41	+0.4
3,279,164	+		PGA1_c31370	0.42	-0.9
3,279,177	-		PGA1_c31370	0.45	-1.2
3,279,224	+		PGA1_c31370	0.56	-1.3
3,279,227	-		PGA1_c31370	0.57	-1.3
3,279,227	-		PGA1_c31370	0.57	-0.1
3,279,253	+		PGA1_c31370	0.63	+0.1
3,279,285	+		PGA1_c31370	0.70	-1.7
3,279,285	+		PGA1_c31370	0.70	-0.6
3,279,290	+		PGA1_c31370	0.71	+0.3
3,279,291	-		PGA1_c31370	0.71	-1.7
3,279,298	-		PGA1_c31370	0.73	+0.4
3,279,303	-		PGA1_c31370	0.74	-1.7
3,279,304	+		PGA1_c31370	0.74	+1.4
3,279,319	+		PGA1_c31370	0.78	+0.6
3,279,319	+		PGA1_c31370	0.78	-2.1
3,279,327	-		PGA1_c31370	0.80	-1.5
3,279,327	-		PGA1_c31370	0.80	-0.5
3,279,359	-		PGA1_c31370	0.87	-2.2
3,279,387	+				+1.3
3,279,395	-				-0.5
3,279,405	+				+0.2
3,279,410	+				-0.1
3,279,418	-		PGA1_c31380	0.15	-0.4
3,279,456	+		PGA1_c31380	0.38	+1.4
3,279,464	-		PGA1_c31380	0.43	+0.8
3,279,472	-		PGA1_c31380	0.48	-1.4
3,279,489	+		PGA1_c31380	0.58	-0.7
3,279,498	+		PGA1_c31380	0.63	-2.1
3,279,503	-		PGA1_c31380	0.66	-0.4
3,279,507	+		PGA1_c31380	0.68	-2.7
3,279,520	-		PGA1_c31380	0.76	-1.7
3,279,628	+				+0.8
3,279,628	+				-0.8
3,279,628	+				-2.4
3,279,636	-				-0.4
3,279,636	-				-0.7
3,279,636	-				+1.3
3,279,636	-				-0.2
3,279,707	-				-0.6
3,279,713	+				-0.3
3,279,713	+				+0.5
3,279,713	+				+0.4
3,279,713	+				-0.4
3,279,713	+				+0.1
3,279,721	-				-0.3
3,279,721	-				+0.4
3,279,721	-				+0.5
3,279,721	-				-0.7
3,279,721	-				+0.3
3,279,721	-				+0.2
3,279,721	-				-0.4
3,279,750	+				+0.7
3,279,769	+				+0.2
3,279,807	-		PGA1_c31390	0.12	-0.4
3,279,807	-		PGA1_c31390	0.12	+1.0
3,279,849	+		PGA1_c31390	0.15	+0.1
3,279,849	+		PGA1_c31390	0.15	-1.1
3,279,861	+		PGA1_c31390	0.15	+0.5
3,279,908	+		PGA1_c31390	0.19	+0.2
3,279,954	-		PGA1_c31390	0.22	-0.4
3,279,954	-		PGA1_c31390	0.22	+1.1
3,280,036	+		PGA1_c31390	0.28	-2.1
3,280,054	+		PGA1_c31390	0.29	-0.2
3,280,062	-		PGA1_c31390	0.30	-0.7
3,280,062	-		PGA1_c31390	0.30	+0.3
3,280,072	-		PGA1_c31390	0.30	-0.7
3,280,083	-		PGA1_c31390	0.31	-0.7
3,280,084	+		PGA1_c31390	0.31	-1.2
3,280,106	+		PGA1_c31390	0.33	-2.7
3,280,122	+		PGA1_c31390	0.34	-0.9
3,280,167	+		PGA1_c31390	0.37	-0.1
3,280,178	+		PGA1_c31390	0.38	-0.1
3,280,178	+		PGA1_c31390	0.38	+0.5
3,280,178	-		PGA1_c31390	0.38	-2.1
3,280,178	-		PGA1_c31390	0.38	+0.6
3,280,183	-		PGA1_c31390	0.38	-1.9
3,280,186	-		PGA1_c31390	0.38	+0.2
3,280,186	-		PGA1_c31390	0.38	+0.1
3,280,186	-		PGA1_c31390	0.38	-1.7
3,280,186	-		PGA1_c31390	0.38	-0.2
3,280,246	+		PGA1_c31390	0.43	-1.1
3,280,246	+		PGA1_c31390	0.43	-0.2
3,280,254	-		PGA1_c31390	0.43	+1.4
3,280,254	-		PGA1_c31390	0.43	-0.7
3,280,298	-		PGA1_c31390	0.46	+0.4
3,280,298	-		PGA1_c31390	0.46	+1.3
3,280,415	+		PGA1_c31390	0.55	+0.8
3,280,415	+		PGA1_c31390	0.55	+0.0
3,280,422	+		PGA1_c31390	0.55	-0.4
3,280,423	-		PGA1_c31390	0.55	+0.8
3,280,423	-		PGA1_c31390	0.55	-1.5
3,280,441	+		PGA1_c31390	0.56	-0.1
3,280,451	+		PGA1_c31390	0.57	-1.1
3,280,451	+		PGA1_c31390	0.57	+0.0
3,280,451	+		PGA1_c31390	0.57	-0.5
3,280,451	+		PGA1_c31390	0.57	-0.7
3,280,451	+		PGA1_c31390	0.57	+0.2
3,280,451	+		PGA1_c31390	0.57	+0.3
3,280,451	+		PGA1_c31390	0.57	-1.2
3,280,451	+		PGA1_c31390	0.57	+0.5
3,280,451	+		PGA1_c31390	0.57	+1.9
3,280,451	+		PGA1_c31390	0.57	-0.6
3,280,451	+		PGA1_c31390	0.57	+0.9
3,280,451	+		PGA1_c31390	0.57	-1.5
3,280,451	+		PGA1_c31390	0.57	-0.9
3,280,451	+		PGA1_c31390	0.57	-0.4
3,280,451	+		PGA1_c31390	0.57	+1.1
3,280,451	+		PGA1_c31390	0.57	+0.2
3,280,451	+		PGA1_c31390	0.57	-0.2
3,280,451	+		PGA1_c31390	0.57	+0.8
3,280,451	+		PGA1_c31390	0.57	-0.5
3,280,451	+		PGA1_c31390	0.57	-0.2
3,280,456	+		PGA1_c31390	0.57	-0.7
3,280,459	-		PGA1_c31390	0.58	+0.5
3,280,459	-		PGA1_c31390	0.58	-0.8
3,280,459	-		PGA1_c31390	0.58	-0.4
3,280,459	-		PGA1_c31390	0.58	+1.1
3,280,459	-		PGA1_c31390	0.58	-2.1
3,280,459	-		PGA1_c31390	0.58	+0.8
3,280,459	-		PGA1_c31390	0.58	-0.5
3,280,459	-		PGA1_c31390	0.58	-0.3
3,280,459	-		PGA1_c31390	0.58	+0.8
3,280,459	-		PGA1_c31390	0.58	+0.1
3,280,461	+		PGA1_c31390	0.58	-1.9
3,280,461	+		PGA1_c31390	0.58	-0.6
3,280,469	-		PGA1_c31390	0.58	-2.0
3,280,469	-		PGA1_c31390	0.58	-0.1
3,280,522	+		PGA1_c31390	0.62	+0.4
3,280,530	+		PGA1_c31390	0.63	+0.6
3,280,538	-		PGA1_c31390	0.63	-0.7
3,280,538	-		PGA1_c31390	0.63	+0.2
3,280,551	+		PGA1_c31390	0.64	-1.6