Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22500

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 20 mM
2,333,481	-		PGA1_c22490	0.12	+0.8
2,333,498	-		PGA1_c22490	0.16	+0.3
2,333,626	+		PGA1_c22490	0.45	+0.8
2,333,647	+		PGA1_c22490	0.50	+0.6
2,333,647	-		PGA1_c22490	0.50	-0.3
2,333,818	-		PGA1_c22490	0.89	-0.8
2,333,855	-				-1.0
2,333,901	-				-0.1
2,333,925	-				+0.1
2,333,940	+				+0.1
2,334,099	+				+0.2
2,334,131	+				-1.9
2,334,165	+				+1.3
2,334,165	+				+2.2
2,334,173	-				-0.4
2,334,173	-				-0.4
2,334,173	-				+1.7
2,334,273	-				+0.3
2,334,281	-				+0.1
2,334,366	+				-0.7
2,334,366	+				-0.1
2,334,540	-		PGA1_c22500	0.31	+2.4
2,334,571	-		PGA1_c22500	0.43	+0.9
2,334,575	-		PGA1_c22500	0.44	+0.3
2,334,674	+		PGA1_c22500	0.82	+1.1
2,334,674	+		PGA1_c22500	0.82	-0.1
2,334,674	+		PGA1_c22500	0.82	-1.6
2,334,674	+		PGA1_c22500	0.82	+0.6
2,334,742	+				-2.8
2,334,745	-				+1.4
2,334,839	-		PGA1_c22510	0.11	+0.3
2,334,841	+		PGA1_c22510	0.12	+0.4
2,334,877	+		PGA1_c22510	0.26	+0.7
2,334,892	-		PGA1_c22510	0.31	+0.2
2,334,892	-		PGA1_c22510	0.31	-0.9
2,334,918	-		PGA1_c22510	0.41	+0.2
2,334,918	-		PGA1_c22510	0.41	-0.0
2,334,944	-		PGA1_c22510	0.51	-1.0
2,334,961	-		PGA1_c22510	0.58	+0.8
2,334,961	-		PGA1_c22510	0.58	-0.4
2,335,455	+				+0.7
2,335,465	+				+0.0
2,335,479	+				+0.2
2,335,479	+				-0.2
2,335,479	+				-0.4
2,335,479	+				-0.8
2,335,479	+				+1.0
2,335,479	+				-1.1
2,335,479	+				-0.2
2,335,479	+				+0.9
2,335,479	+				-1.1
2,335,479	+				+0.4
2,335,479	+				-1.2
2,335,479	+				+0.9
2,335,479	+				-2.3
2,335,479	+				-0.6
2,335,479	+				+0.3
2,335,479	+				+0.4
2,335,479	+				-0.1
2,335,479	+				-1.0
2,335,479	+				+0.9
2,335,479	+				-1.3
2,335,479	+				+0.4
2,335,479	+				-0.7
2,335,479	+				+0.9
2,335,479	+				-0.6
2,335,479	+				+0.8
2,335,479	+				+1.1
2,335,479	+				-0.2
2,335,479	+				-0.1
2,335,479	+				-0.4
2,335,482	-				-0.5
2,335,487	-				-0.5
2,335,487	-				+0.7
2,335,487	-				+1.8
2,335,487	-				+1.0
2,335,487	-				+0.5
2,335,487	-				-1.0
2,335,487	-				+0.9
2,335,487	-				+0.1
2,335,487	-				-0.8
2,335,487	-				-0.4
2,335,487	-				-0.4
2,335,487	-				-0.3
2,335,487	-				+1.6
2,335,487	-				+0.4
2,335,487	-				+0.8
2,335,487	-				+0.6
2,335,487	-				+0.9
2,335,487	-				-0.7
2,335,487	-				-0.6
2,335,487	-				-0.1
2,335,487	-				+0.4
2,335,495	-				+1.4
2,335,509	-				-0.7
2,335,509	-				-0.1
2,335,554	+				-0.6
2,335,559	+				+1.6
2,335,562	-				+0.2
2,335,562	-				-1.0
2,335,593	-				-1.0
2,335,593	-				-0.2
2,335,593	-				+0.9
2,335,600	+				-1.3
2,335,600	+				-0.6
2,335,600	+				-0.1
2,335,600	+				+0.1
2,335,601	-				-1.2
2,335,607	+				+0.4
2,335,607	+				+0.3
2,335,607	+				-0.6
2,335,607	+				+1.0
2,335,607	+				-0.4
2,335,607	+				+0.8
2,335,607	+				+1.0
2,335,607	+				+0.3
2,335,607	+				-1.7
2,335,607	+				-0.0
2,335,607	+				+0.7
2,335,607	+				-1.0
2,335,607	+				+0.6
2,335,607	+				-0.4
2,335,607	+				-0.3
2,335,607	+				-0.9
2,335,608	-				+2.0
2,335,608	-				-0.6
2,335,608	-				-0.0
2,335,608	-				-0.6
2,335,608	-				-0.7
2,335,608	-				+0.9
2,335,608	-				+2.0
2,335,608	-				+1.1
2,335,608	-				-1.6
2,335,608	-				+0.5
2,335,608	-				-1.1
2,335,608	-				+0.1
2,335,608	-				+0.4
2,335,613	-				-0.9
2,335,614	+				+1.6
2,335,615	-				-1.9
2,335,615	-				-0.9
2,335,615	-				+1.2
2,335,615	-				-0.3
2,335,615	-				+0.4
2,335,615	-				+0.3
2,335,615	-				-1.9
2,335,615	-				-0.9
2,335,615	-				+1.2
2,335,615	-				+0.0
2,335,615	-				+0.2
2,335,615	-				-0.6
2,335,615	-				-1.1
2,335,615	-				-0.4
2,335,615	-				+2.3
2,335,615	-				+0.1
2,335,615	-				+1.1
2,335,615	-				-0.6
2,335,615	-				-1.4
2,335,615	-				+1.3
2,335,615	-				+0.1
2,335,668	+				-1.4
2,335,676	-				-1.2
2,335,681	+				-0.1
2,335,691	+				-0.4
2,335,691	+				+1.2
2,335,692	-				-0.9
2,335,694	+				+1.3
2,335,694	+				-0.3
2,335,694	+				+0.2
2,335,694	+				+0.4
2,335,694	+				-0.2
2,335,694	+				-0.0
2,335,694	+				-1.1
2,335,694	+				-0.3
2,335,694	+				+0.2
2,335,694	+				+0.4
2,335,694	+				+0.4
2,335,694	+				+0.0
2,335,694	+				+2.3
2,335,694	+				+2.2
2,335,694	+				+0.1
2,335,694	+				-0.1
2,335,694	+				-0.6
2,335,694	+				-0.1
2,335,694	+				+0.0
2,335,694	+				+0.0
2,335,694	+				-0.4
2,335,694	+				+0.0
2,335,694	+				-0.0
2,335,694	+				-1.3
2,335,694	+				-1.2
2,335,694	+				+1.2
2,335,694	+				+0.3
2,335,694	+				+0.7
2,335,694	+				-0.0
2,335,694	+				-1.1
2,335,694	+				-0.5
2,335,694	+				+1.4
2,335,694	+				-1.1
2,335,694	+				-1.1
2,335,694	+				-0.1
2,335,694	+				-0.6
2,335,694	+				-0.2
2,335,694	+				+0.6
2,335,694	+				-2.0
2,335,694	+				-0.2
2,335,694	+				+1.3
2,335,694	+				-0.3
2,335,694	+				+1.2
2,335,694	+				-1.1
2,335,694	+				-1.4
2,335,694	+				-0.4
2,335,694	+				+0.7
2,335,699	+				-1.6
2,335,702	-				+0.2
2,335,702	-				-0.4
2,335,702	-				-0.8
2,335,702	-				+1.8
2,335,702	-				-0.7
2,335,702	-				-0.3
2,335,702	-				-0.4
2,335,702	-				+0.5
2,335,702	-				+0.3
2,335,702	-				+0.7
2,335,702	-				-0.1
2,335,702	-				-0.9
2,335,702	-				+1.1
2,335,702	-				+0.9
2,335,702	-				-0.2
2,335,702	-				+1.6
2,335,702	-				-0.9
2,335,702	-				-0.7
2,335,702	-				+1.0
2,335,702	-				-1.7
2,335,702	-				-1.0
2,335,702	-				-1.4
2,335,702	-				-1.0
2,335,702	-				-0.5
2,335,702	-				-0.5
2,335,702	-				+0.5
2,335,702	-				-0.1
2,335,702	-				-0.6
2,335,702	-				-0.0
2,335,702	-				+0.7
2,335,702	-				-0.6
2,335,702	-				+0.9
2,335,702	-				-0.7
2,335,702	-				-0.1
2,335,702	-				+1.4
2,335,702	-				+1.4
2,335,702	-				-1.1
2,335,702	-				-0.3
2,335,702	-				+1.1
2,335,702	-				-0.9
2,335,702	-				-0.7
2,335,702	-				-0.4
2,335,702	-				+1.2
2,335,702	-				-0.9
2,335,702	-				+0.8
2,335,702	-				-0.2
2,335,702	-				+1.4
2,335,702	-				-1.3
2,335,702	-				-1.1
2,335,702	-				+0.7
2,335,702	-				+0.3
2,335,702	-				-0.1
2,335,702	-				-1.9
2,335,702	-				+0.5
2,335,702	-				+2.3
2,335,702	-				+0.3
2,335,702	-				-1.1
2,335,702	-				+1.4
2,335,702	-				+1.6
2,335,702	-				+0.0
2,335,704	+				+0.9
2,335,704	+				-1.5
2,335,706	+				+1.0
2,335,706	+				+1.2
2,335,709	-				+0.1
2,335,712	-				-0.8
2,335,713	-				+0.5
2,335,714	-				-1.7
2,335,715	+				-1.4