Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15960

Experiment: m.b. 1-ethyl-3-methylimidazolium acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium acetate 20 mM
1,654,437	-		PGA1_c15950	0.36	-1.0
1,654,501	+		PGA1_c15950	0.41	+0.3
1,654,542	-		PGA1_c15950	0.44	+0.6
1,654,584	-		PGA1_c15950	0.47	+0.4
1,654,655	-		PGA1_c15950	0.52	+1.1
1,654,748	+		PGA1_c15950	0.59	+0.2
1,654,763	+		PGA1_c15950	0.61	-0.3
1,654,770	+		PGA1_c15950	0.61	+0.8
1,654,788	-		PGA1_c15950	0.63	-0.0
1,654,797	+		PGA1_c15950	0.63	-2.3
1,654,797	+		PGA1_c15950	0.63	+0.5
1,654,797	+		PGA1_c15950	0.63	-0.3
1,654,797	+		PGA1_c15950	0.63	+0.3
1,654,805	-		PGA1_c15950	0.64	-0.4
1,654,826	+		PGA1_c15950	0.65	-1.1
1,654,994	+		PGA1_c15950	0.78	+1.1
1,654,994	+		PGA1_c15950	0.78	+0.8
1,654,994	+		PGA1_c15950	0.78	-0.0
1,654,994	+		PGA1_c15950	0.78	+0.1
1,654,994	+		PGA1_c15950	0.78	-0.3
1,654,994	+		PGA1_c15950	0.78	+0.7
1,654,994	+		PGA1_c15950	0.78	+0.7
1,654,994	+		PGA1_c15950	0.78	+0.5
1,654,994	+		PGA1_c15950	0.78	-0.4
1,654,994	+		PGA1_c15950	0.78	+0.8
1,654,995	+		PGA1_c15950	0.78	+0.1
1,654,995	+		PGA1_c15950	0.78	-0.5
1,654,995	+		PGA1_c15950	0.78	-1.2
1,654,995	+		PGA1_c15950	0.78	-2.4
1,655,002	-		PGA1_c15950	0.79	+0.7
1,655,002	-		PGA1_c15950	0.79	-0.2
1,655,002	-		PGA1_c15950	0.79	+1.1
1,655,002	-		PGA1_c15950	0.79	-0.7
1,655,002	-		PGA1_c15950	0.79	+0.5
1,655,002	-		PGA1_c15950	0.79	-1.0
1,655,003	-		PGA1_c15950	0.79	+0.0
1,655,003	-		PGA1_c15950	0.79	+0.1
1,655,035	-		PGA1_c15950	0.81	+0.7
1,655,071	+		PGA1_c15950	0.84	-0.2
1,655,071	+		PGA1_c15950	0.84	+0.5
1,655,071	+		PGA1_c15950	0.84	+0.6
1,655,079	-		PGA1_c15950	0.85	+1.3
1,655,103	+		PGA1_c15950	0.86	+0.8
1,655,116	-		PGA1_c15950	0.87	-0.4
1,655,131	-		PGA1_c15950	0.88	-0.9
1,655,224	+				+0.5
1,655,232	-				-0.9
1,655,266	-				+0.7
1,655,390	+				-1.6
1,655,399	+				-0.0
1,655,479	-				-0.5
1,655,536	-				+1.7
1,655,561	+		PGA1_c15960	0.11	+0.3
1,655,561	+		PGA1_c15960	0.11	-0.3
1,655,569	-		PGA1_c15960	0.11	+0.1
1,655,569	-		PGA1_c15960	0.11	+1.8
1,655,569	-		PGA1_c15960	0.11	+0.0
1,655,771	+		PGA1_c15960	0.25	-0.8
1,655,790	+		PGA1_c15960	0.26	-0.6
1,655,820	+		PGA1_c15960	0.28	+0.5
1,655,820	+		PGA1_c15960	0.28	-2.1
1,655,820	+		PGA1_c15960	0.28	+0.2
1,655,820	+		PGA1_c15960	0.28	-0.2
1,655,820	+		PGA1_c15960	0.28	+1.3
1,655,820	+		PGA1_c15960	0.28	+1.3
1,655,820	+		PGA1_c15960	0.28	-0.9
1,655,820	+		PGA1_c15960	0.28	-0.3
1,655,820	+		PGA1_c15960	0.28	-1.6
1,655,820	+		PGA1_c15960	0.28	+0.3
1,655,828	-		PGA1_c15960	0.28	+0.1
1,655,828	-		PGA1_c15960	0.28	+1.1
1,655,828	-		PGA1_c15960	0.28	+1.1
1,655,828	-		PGA1_c15960	0.28	+0.7
1,655,852	-		PGA1_c15960	0.30	+2.0
1,655,904	-		PGA1_c15960	0.33	+0.8
1,655,976	+		PGA1_c15960	0.38	+0.9
1,655,976	+		PGA1_c15960	0.38	-1.0
1,655,978	+		PGA1_c15960	0.38	+1.0
1,656,010	-		PGA1_c15960	0.40	+0.5
1,656,046	+		PGA1_c15960	0.42	-0.5
1,656,046	+		PGA1_c15960	0.42	+0.6
1,656,046	+		PGA1_c15960	0.42	+1.2
1,656,063	+		PGA1_c15960	0.43	+0.1
1,656,095	+		PGA1_c15960	0.46	-0.0
1,656,227	+		PGA1_c15960	0.54	+0.2
1,656,227	+		PGA1_c15960	0.54	+0.2
1,656,235	-		PGA1_c15960	0.55	+0.0
1,656,251	+		PGA1_c15960	0.56	-1.1
1,656,291	-		PGA1_c15960	0.58	+0.9
1,656,308	-		PGA1_c15960	0.59	+1.3
1,656,325	-		PGA1_c15960	0.60	+0.9
1,656,332	-		PGA1_c15960	0.61	+1.3
1,656,361	+		PGA1_c15960	0.63	+0.8
1,656,371	+		PGA1_c15960	0.63	+1.0
1,656,433	+		PGA1_c15960	0.67	+1.1
1,656,434	+		PGA1_c15960	0.67	+0.5
1,656,434	+		PGA1_c15960	0.67	+1.0
1,656,492	-		PGA1_c15960	0.71	+0.9
1,656,519	-		PGA1_c15960	0.73	-2.5
1,656,523	+		PGA1_c15960	0.73	-0.0
1,656,525	+		PGA1_c15960	0.73	+0.5
1,656,575	-		PGA1_c15960	0.77	+0.3
1,656,601	+		PGA1_c15960	0.78	+0.2
1,656,604	-		PGA1_c15960	0.78	+1.1
1,656,612	-		PGA1_c15960	0.79	+0.3
1,656,621	+		PGA1_c15960	0.80	+1.1
1,656,692	+		PGA1_c15960	0.84	-0.1
1,656,692	+		PGA1_c15960	0.84	+1.3
1,656,693	-		PGA1_c15960	0.84	+0.3
1,656,693	-		PGA1_c15960	0.84	-0.0
1,656,716	-		PGA1_c15960	0.86	+0.2
1,656,756	-		PGA1_c15960	0.88	+0.9
1,656,761	-		PGA1_c15960	0.89	+0.6
1,656,802	+				-0.3
1,656,802	+				-0.7
1,656,805	+				-0.6
1,656,810	+				+1.7
1,656,810	+				+0.4
1,656,810	-				+1.7
1,656,810	-				-0.5
1,656,810	-				+0.2
1,656,812	+				+1.7
1,656,818	-				+1.3
1,656,818	-				+1.9
1,656,818	-				+0.3
1,656,818	-				+1.8
1,656,825	-				+0.9
1,656,842	+				-0.3
1,656,850	+				+1.5
1,656,852	+				+1.6
1,656,857	-				+0.6
1,656,867	+				+1.4
1,656,898	+				+0.9
1,656,898	+				+0.9
1,656,898	+				+1.0
1,656,906	-				+1.4
1,656,906	-				+0.6
1,656,906	-				+0.3
1,656,906	-				+1.1
1,656,906	-				-1.1
1,656,937	+				-0.7
1,656,942	+				+0.3
1,656,942	+				+0.3
1,656,942	+				+0.7
1,656,942	+				+1.4
1,656,947	+				-0.5
1,656,948	+				+0.7
1,656,950	-				-0.3
1,656,950	-				-0.2
1,656,950	-				-1.0
1,656,950	-				+1.9
1,656,968	-				+1.5
1,656,968	-				+1.6
1,657,003	-				+1.0
1,657,009	+				-0.3
1,657,019	+				+0.5
1,657,035	+				-0.4
1,657,069	+				+0.3
1,657,079	+				+2.1
1,657,137	+				+2.3
1,657,148	+				+0.6
1,657,150	-				+1.2
1,657,177	+				-1.3
1,657,183	+				-0.5
1,657,190	+				+0.7
1,657,191	-				-0.9
1,657,196	+				+0.3
1,657,232	+				-0.4
1,657,245	+				+0.4
1,657,276	-				+1.3
1,657,355	+				+0.9
1,657,355	+				+0.9
1,657,362	+				-0.1
1,657,362	+				+0.1
1,657,363	-				-1.2
1,657,363	-				+1.8
1,657,365	+				+0.7
1,657,365	+				+1.6
1,657,370	-				+0.3
1,657,370	-				+1.5
1,657,370	-				+1.2
1,657,370	-				+2.1
1,657,370	-				-0.1
1,657,370	-				+0.5
1,657,370	-				+0.5
1,657,385	+				-0.1
1,657,395	+				+1.1
1,657,397	+				-0.9
1,657,402	+				+0.9
1,657,403	-				+0.2
1,657,412	+				-0.3
1,657,412	+				+0.3
1,657,412	+				+2.2
1,657,446	+				+0.6