Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0335 and Dshi_0336 are separated by 4 nucleotides Dshi_0336 and Dshi_0337 are separated by 941 nucleotides
Dshi_0335: Dshi_0335 - pyridine nucleotide-disulphide oxidoreductase dimerisation region (RefSeq), at 322,338 to 323,750
_0335
Dshi_0336: Dshi_0336 - SNARE associated Golgi protein (RefSeq), at 323,755 to 324,486
_0336
Dshi_0337: Dshi_0337 - ATPase MipZ (RefSeq), at 325,428 to 326,237
_0337
Position (kb) 323
324
325 Strain fitness (log2 ratio) -1
0
1
2 at 322.807 kb on + strand, within Dshi_0335 at 323.157 kb on - strand, within Dshi_0335 at 323.165 kb on - strand, within Dshi_0335 at 323.173 kb on - strand, within Dshi_0335 at 323.187 kb on + strand, within Dshi_0335 at 323.263 kb on - strand, within Dshi_0335 at 323.263 kb on - strand, within Dshi_0335 at 323.263 kb on - strand, within Dshi_0335 at 323.263 kb on - strand, within Dshi_0335 at 323.389 kb on - strand, within Dshi_0335 at 323.427 kb on + strand, within Dshi_0335 at 323.427 kb on + strand, within Dshi_0335 at 323.558 kb on + strand, within Dshi_0335 at 323.568 kb on - strand, within Dshi_0335 at 323.568 kb on - strand, within Dshi_0335 at 323.583 kb on + strand, within Dshi_0335 at 323.613 kb on - strand at 323.675 kb on - strand at 323.686 kb on + strand at 323.696 kb on + strand at 323.696 kb on + strand at 323.746 kb on + strand at 323.753 kb on - strand at 323.761 kb on - strand at 323.770 kb on - strand at 323.797 kb on - strand at 323.819 kb on - strand at 323.871 kb on - strand, within Dshi_0336 at 323.914 kb on + strand, within Dshi_0336 at 323.914 kb on + strand, within Dshi_0336 at 323.914 kb on + strand, within Dshi_0336 at 323.914 kb on + strand, within Dshi_0336 at 324.072 kb on + strand, within Dshi_0336 at 324.077 kb on + strand, within Dshi_0336 at 324.077 kb on + strand, within Dshi_0336 at 324.085 kb on - strand, within Dshi_0336 at 324.099 kb on + strand, within Dshi_0336 at 324.138 kb on + strand, within Dshi_0336 at 324.240 kb on + strand, within Dshi_0336 at 324.240 kb on + strand, within Dshi_0336 at 324.305 kb on - strand, within Dshi_0336 at 324.311 kb on - strand, within Dshi_0336 at 324.369 kb on + strand, within Dshi_0336 at 324.376 kb on + strand, within Dshi_0336 at 324.385 kb on + strand, within Dshi_0336 at 324.393 kb on + strand, within Dshi_0336 at 324.395 kb on - strand, within Dshi_0336 at 324.443 kb on + strand at 324.448 kb on + strand at 324.546 kb on + strand at 324.546 kb on + strand at 324.554 kb on - strand at 324.554 kb on - strand at 324.573 kb on - strand at 324.634 kb on + strand at 324.732 kb on + strand at 324.753 kb on + strand at 324.870 kb on + strand at 324.925 kb on - strand at 324.981 kb on - strand at 325.180 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 322,807 + Dshi_0335 0.33 +0.5 323,157 - Dshi_0335 0.58 -0.0 323,165 - Dshi_0335 0.59 -0.3 323,173 - Dshi_0335 0.59 +0.1 323,187 + Dshi_0335 0.60 +0.3 323,263 - Dshi_0335 0.65 +0.4 323,263 - Dshi_0335 0.65 -0.2 323,263 - Dshi_0335 0.65 -0.0 323,263 - Dshi_0335 0.65 +1.1 323,389 - Dshi_0335 0.74 +0.4 323,427 + Dshi_0335 0.77 +0.6 323,427 + Dshi_0335 0.77 +0.0 323,558 + Dshi_0335 0.86 +1.2 323,568 - Dshi_0335 0.87 +0.7 323,568 - Dshi_0335 0.87 +1.0 323,583 + Dshi_0335 0.88 +0.4 323,613 - +0.1 323,675 - +2.7 323,686 + +0.3 323,696 + +1.0 323,696 + +0.5 323,746 + -0.1 323,753 - +0.5 323,761 - +0.7 323,770 - +2.1 323,797 - +0.3 323,819 - +0.3 323,871 - Dshi_0336 0.16 +0.1 323,914 + Dshi_0336 0.22 +0.5 323,914 + Dshi_0336 0.22 +0.3 323,914 + Dshi_0336 0.22 +1.9 323,914 + Dshi_0336 0.22 +2.0 324,072 + Dshi_0336 0.43 +0.3 324,077 + Dshi_0336 0.44 +1.1 324,077 + Dshi_0336 0.44 +0.4 324,085 - Dshi_0336 0.45 +0.4 324,099 + Dshi_0336 0.47 +2.1 324,138 + Dshi_0336 0.52 +0.6 324,240 + Dshi_0336 0.66 +1.5 324,240 + Dshi_0336 0.66 +0.1 324,305 - Dshi_0336 0.75 -0.5 324,311 - Dshi_0336 0.76 +0.1 324,369 + Dshi_0336 0.84 +0.5 324,376 + Dshi_0336 0.85 +0.1 324,385 + Dshi_0336 0.86 +1.0 324,393 + Dshi_0336 0.87 +0.6 324,395 - Dshi_0336 0.87 +0.5 324,443 + +1.7 324,448 + +0.2 324,546 + -0.0 324,546 + +0.8 324,554 - +0.6 324,554 - -0.1 324,573 - -0.3 324,634 + -0.2 324,732 + +0.3 324,753 + +0.6 324,870 + -0.1 324,925 - +1.7 324,981 - -0.4 325,180 + -0.5
Or see this region's nucleotide sequence