Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_78p00140
Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. 1-ethyl-3-methylimidazolium lysine 1 mM |
---|---|---|---|---|---|
remove | |||||
15,965 | - | PGA1_78p00130 | 0.29 | +0.5 | |
16,567 | + | PGA1_78p00130 | 0.83 | +2.0 | |
16,720 | - | +1.0 | |||
16,720 | - | +1.0 | |||
17,056 | + | PGA1_78p00140 | 0.29 | +0.2 | |
17,188 | + | PGA1_78p00140 | 0.41 | +1.1 | |
17,312 | - | PGA1_78p00140 | 0.53 | +0.7 | |
17,370 | - | PGA1_78p00140 | 0.58 | +1.2 | |
17,821 | + | +0.5 | |||
18,010 | - | PGA1_78p00150 | 0.17 | -2.0 | |
18,452 | - | PGA1_78p00150 | 0.59 | +0.9 | |
18,683 | + | PGA1_78p00150 | 0.82 | +0.3 |
Or see this region's nucleotide sequence