Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36390

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
3,805,120	+		PGA1_c36370	0.34	+0.2
3,805,120	-		PGA1_c36370	0.34	+1.2
3,805,128	-		PGA1_c36370	0.35	+0.4
3,805,128	-		PGA1_c36370	0.35	+0.0
3,805,161	-		PGA1_c36370	0.40	-0.0
3,805,161	-		PGA1_c36370	0.40	-0.3
3,805,271	+		PGA1_c36370	0.55	-0.3
3,805,271	+		PGA1_c36370	0.55	-1.5
3,805,271	+		PGA1_c36370	0.55	-0.8
3,805,271	+		PGA1_c36370	0.55	-0.4
3,805,279	-		PGA1_c36370	0.56	-1.0
3,805,279	-		PGA1_c36370	0.56	-0.9
3,805,279	-		PGA1_c36370	0.56	+0.5
3,805,279	-		PGA1_c36370	0.56	-0.5
3,805,296	+		PGA1_c36370	0.58	+0.3
3,805,296	+		PGA1_c36370	0.58	-0.5
3,805,299	-		PGA1_c36370	0.59	-0.0
3,805,359	-		PGA1_c36370	0.67	-0.8
3,805,359	-		PGA1_c36370	0.67	-1.6
3,805,359	-		PGA1_c36370	0.67	-0.6
3,805,361	+		PGA1_c36370	0.67	+0.9
3,805,361	+		PGA1_c36370	0.67	-0.8
3,805,361	+		PGA1_c36370	0.67	-0.4
3,805,361	+		PGA1_c36370	0.67	+0.1
3,805,369	-		PGA1_c36370	0.68	-0.3
3,805,369	-		PGA1_c36370	0.68	-1.2
3,805,369	-		PGA1_c36370	0.68	-1.1
3,805,369	-		PGA1_c36370	0.68	-0.5
3,805,450	-		PGA1_c36370	0.79	-0.1
3,805,634	+				+0.1
3,805,644	+				+0.4
3,805,662	+				-1.4
3,805,666	+				+0.6
3,805,707	+				+0.5
3,805,707	+				-0.1
3,805,716	-		PGA1_c36380	0.11	-0.5
3,805,716	-		PGA1_c36380	0.11	-0.5
3,805,720	+		PGA1_c36380	0.12	+0.2
3,805,723	-		PGA1_c36380	0.13	+0.1
3,805,723	-		PGA1_c36380	0.13	+0.3
3,805,809	+		PGA1_c36380	0.38	-2.0
3,805,809	+		PGA1_c36380	0.38	-0.7
3,805,809	+		PGA1_c36380	0.38	-0.2
3,805,809	+		PGA1_c36380	0.38	-0.8
3,805,809	+		PGA1_c36380	0.38	-0.7
3,805,812	-		PGA1_c36380	0.39	+0.9
3,805,817	-		PGA1_c36380	0.40	+0.9
3,805,817	-		PGA1_c36380	0.40	+0.9
3,805,848	+		PGA1_c36380	0.49	+1.1
3,805,848	+		PGA1_c36380	0.49	-0.2
3,805,856	-		PGA1_c36380	0.51	+1.6
3,805,856	-		PGA1_c36380	0.51	-0.4
3,805,877	+		PGA1_c36380	0.57	+0.4
3,805,904	-		PGA1_c36380	0.65	+0.8
3,805,909	+		PGA1_c36380	0.66	+0.1
3,805,937	+		PGA1_c36380	0.74	+0.3
3,806,014	+				-0.5
3,806,017	-				+0.8
3,806,032	-				-1.4
3,806,070	-				-0.9
3,806,073	+				+0.1
3,806,094	+				-1.1
3,806,099	+				+1.1
3,806,099	+				+0.6
3,806,102	-				-1.6
3,806,102	-				-0.1
3,806,181	+				+0.3
3,806,324	+		PGA1_c36390	0.21	+0.5
3,806,326	-		PGA1_c36390	0.21	-0.5
3,806,326	-		PGA1_c36390	0.21	+0.9
3,806,357	-		PGA1_c36390	0.24	+0.6
3,806,369	-		PGA1_c36390	0.25	-0.9
3,806,399	+		PGA1_c36390	0.28	+1.1
3,806,399	+		PGA1_c36390	0.28	-0.4
3,806,407	-		PGA1_c36390	0.29	-0.5
3,806,603	+		PGA1_c36390	0.47	+0.8
3,806,611	-		PGA1_c36390	0.48	+1.2
3,806,611	-		PGA1_c36390	0.48	-0.4
3,806,646	-		PGA1_c36390	0.51	+0.5
3,806,647	+		PGA1_c36390	0.51	+0.8
3,806,725	-		PGA1_c36390	0.59	+1.4
3,806,771	-		PGA1_c36390	0.63	-0.3
3,806,776	+		PGA1_c36390	0.63	+0.9
3,806,906	-		PGA1_c36390	0.76	-0.3
3,806,927	-		PGA1_c36390	0.78	+1.0
3,806,965	-		PGA1_c36390	0.81	-1.1
3,806,978	+		PGA1_c36390	0.83	+0.3
3,807,042	+		PGA1_c36390	0.89	+0.5
3,807,054	-		PGA1_c36390	0.90	+1.2
3,807,087	-				+1.1
3,807,115	+				+0.1
3,807,124	+				-0.5
3,807,124	+				-0.3
3,807,167	+				-0.8
3,807,183	-				-0.8
3,807,348	+				+1.1
3,807,411	-		PGA1_c36400	0.15	+0.8
3,807,494	+		PGA1_c36400	0.23	-0.0
3,807,502	-		PGA1_c36400	0.23	+0.8
3,807,576	+		PGA1_c36400	0.30	+1.3
3,807,576	+		PGA1_c36400	0.30	-0.5
3,807,669	-		PGA1_c36400	0.38	+1.4
3,807,671	-		PGA1_c36400	0.38	-1.1
3,807,671	-		PGA1_c36400	0.38	-0.6
3,807,744	+		PGA1_c36400	0.45	+1.1
3,807,874	+		PGA1_c36400	0.56	+0.5
3,807,881	+		PGA1_c36400	0.57	-0.7
3,807,884	+		PGA1_c36400	0.57	+2.0
3,807,889	+		PGA1_c36400	0.58	+0.4
3,807,897	-		PGA1_c36400	0.59	-1.1
3,807,913	+		PGA1_c36400	0.60	-0.5
3,807,939	-		PGA1_c36400	0.62	-0.9
3,807,961	+		PGA1_c36400	0.64	+0.2
3,807,977	-		PGA1_c36400	0.66	+0.1
3,807,977	-		PGA1_c36400	0.66	+0.5
3,807,995	-		PGA1_c36400	0.67	-0.7
3,808,022	+		PGA1_c36400	0.70	-0.6
3,808,025	-		PGA1_c36400	0.70	-2.5
3,808,079	+		PGA1_c36400	0.75	-1.5
3,808,109	-		PGA1_c36400	0.77	+0.3
3,808,134	+		PGA1_c36400	0.80	+0.3
3,808,142	-		PGA1_c36400	0.80	-0.1
3,808,142	-		PGA1_c36400	0.80	+0.2
3,808,142	-		PGA1_c36400	0.80	+0.8