Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36090

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
3,773,850	+				-0.8
3,773,864	-				+0.8
3,773,870	-				+0.7
3,773,896	-				+0.0
3,773,990	+				-0.1
3,774,044	+		PGA1_c36090	0.12	+0.5
3,774,049	+		PGA1_c36090	0.12	+0.9
3,774,052	-		PGA1_c36090	0.13	+0.7
3,774,052	-		PGA1_c36090	0.13	-0.5
3,774,196	-		PGA1_c36090	0.22	+0.5
3,774,264	+		PGA1_c36090	0.27	+1.4
3,774,272	-		PGA1_c36090	0.28	+1.9
3,774,277	+		PGA1_c36090	0.28	-0.2
3,774,278	-		PGA1_c36090	0.28	+0.7
3,774,280	+		PGA1_c36090	0.28	+1.5
3,774,339	+		PGA1_c36090	0.32	-0.1
3,774,339	+		PGA1_c36090	0.32	-0.1
3,774,341	+		PGA1_c36090	0.33	+0.5
3,774,347	-		PGA1_c36090	0.33	+0.6
3,774,347	-		PGA1_c36090	0.33	-1.4
3,774,347	-		PGA1_c36090	0.33	-1.3
3,774,347	-		PGA1_c36090	0.33	+0.5
3,774,381	+		PGA1_c36090	0.35	+0.5
3,774,389	-		PGA1_c36090	0.36	-2.0
3,774,389	-		PGA1_c36090	0.36	+0.4
3,774,389	-		PGA1_c36090	0.36	+1.0
3,774,389	-		PGA1_c36090	0.36	+0.4
3,774,394	+		PGA1_c36090	0.36	-2.3
3,774,397	-		PGA1_c36090	0.36	-0.3
3,774,416	+		PGA1_c36090	0.38	-1.1
3,774,421	+		PGA1_c36090	0.38	-0.5
3,774,424	-		PGA1_c36090	0.38	+0.4
3,774,426	+		PGA1_c36090	0.38	+1.0
3,774,431	+		PGA1_c36090	0.39	+0.4
3,774,455	-		PGA1_c36090	0.40	-0.1
3,774,534	+		PGA1_c36090	0.46	+0.5
3,774,534	+		PGA1_c36090	0.46	-0.9
3,774,534	+		PGA1_c36090	0.46	+1.3
3,774,534	+		PGA1_c36090	0.46	+1.5
3,774,539	+		PGA1_c36090	0.46	+0.7
3,774,605	-		PGA1_c36090	0.51	+0.5
3,774,736	-		PGA1_c36090	0.60	+0.6
3,774,777	+		PGA1_c36090	0.63	+0.3
3,774,777	+		PGA1_c36090	0.63	+0.5
3,774,777	+		PGA1_c36090	0.63	+0.1
3,774,785	-		PGA1_c36090	0.63	-0.1
3,774,785	-		PGA1_c36090	0.63	+0.5
3,774,787	+		PGA1_c36090	0.63	+0.2
3,774,877	-		PGA1_c36090	0.70	+1.8
3,774,953	+		PGA1_c36090	0.75	+0.5
3,774,953	+		PGA1_c36090	0.75	+0.7
3,774,953	+		PGA1_c36090	0.75	-1.7
3,774,961	-		PGA1_c36090	0.75	+0.7
3,775,000	-		PGA1_c36090	0.78	-0.0
3,775,015	+		PGA1_c36090	0.79	+0.2
3,775,072	-		PGA1_c36090	0.83	+0.9
3,775,126	-		PGA1_c36090	0.87	+1.1
3,775,192	+				-0.3
3,775,195	+				-0.4
3,775,244	+				+0.4
3,775,252	-				+0.8
3,775,269	+				-1.5
3,775,311	+				-2.2
3,775,335	-				+0.5
3,775,355	-				-0.5
3,775,379	-				+0.7
3,775,418	+				+0.5
3,775,477	-				-0.1
3,775,483	+				+1.2
3,775,483	+				+0.2
3,775,483	+				-0.0
3,775,491	-				-1.2
3,775,491	-				-1.0
3,775,529	+				-1.5
3,775,537	-				+0.8
3,775,737	+				-1.7
3,775,745	-				-1.8
3,775,818	+				-0.6
3,775,826	-				+0.4
3,775,836	-		PGA1_c36100	0.10	-0.8
3,775,893	+		PGA1_c36100	0.11	+0.1
3,775,894	-		PGA1_c36100	0.11	-1.2
3,775,980	+		PGA1_c36100	0.13	-0.1
3,776,031	-		PGA1_c36100	0.14	-0.4
3,776,051	+		PGA1_c36100	0.15	-1.9
3,776,059	-		PGA1_c36100	0.15	+0.9
3,776,078	+		PGA1_c36100	0.15	-0.1
3,776,148	-		PGA1_c36100	0.17	+0.6
3,776,180	+		PGA1_c36100	0.18	+0.4
3,776,237	-		PGA1_c36100	0.19	+0.3
3,776,267	+		PGA1_c36100	0.20	-0.2