Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35180

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
3,689,458	+		PGA1_c35170	0.10	-0.5
3,689,505	+		PGA1_c35170	0.17	-0.6
3,689,568	-		PGA1_c35170	0.25	+1.9
3,689,724	-		PGA1_c35170	0.46	-0.0
3,689,989	+		PGA1_c35170	0.82	+0.1
3,690,007	+		PGA1_c35170	0.85	+0.5
3,690,093	+				+0.3
3,690,096	+				+2.4
3,690,096	+				-0.2
3,690,096	+				-0.2
3,690,098	+				+0.5
3,690,104	-				+1.3
3,690,161	-				-0.5
3,690,186	+				+0.5
3,690,186	+				-0.5
3,690,186	+				-0.0
3,690,194	-				-0.7
3,690,194	-				-1.5
3,690,194	-				+0.3
3,690,204	+				+0.9
3,690,225	-				-0.1
3,690,225	-				+0.1
3,690,225	-				+0.4
3,690,225	-				-0.2
3,690,766	+				-0.9
3,690,771	+				-1.1
3,690,779	+				-0.8
3,690,860	-		PGA1_c35190	0.18	+0.3
3,690,860	-		PGA1_c35190	0.18	-0.4
3,690,880	+		PGA1_c35190	0.22	+0.2
3,690,923	+		PGA1_c35190	0.31	-0.2
3,690,987	+		PGA1_c35190	0.43	-0.8
3,690,987	+		PGA1_c35190	0.43	-1.5
3,690,995	-		PGA1_c35190	0.45	+0.0
3,691,029	-		PGA1_c35190	0.51	-1.9
3,691,036	-		PGA1_c35190	0.53	-2.3
3,691,184	+		PGA1_c35190	0.82	+0.5
3,691,184	+		PGA1_c35190	0.82	-0.6
3,691,184	+		PGA1_c35190	0.82	-0.8
3,691,198	-		PGA1_c35190	0.85	+1.3
3,691,209	+		PGA1_c35190	0.87	+0.3
3,691,292	-				+0.4
3,691,292	-				-0.5
3,691,292	-				+1.7
3,691,300	+				+0.2
3,691,311	-				-1.2
3,691,316	-				-0.8
3,691,320	+				-0.5
3,691,330	+				-2.7
3,691,395	-				-1.5
3,691,416	+				-1.2
3,691,435	-				-0.4
3,691,460	-		PGA1_c35200	0.11	-2.9
3,691,468	-		PGA1_c35200	0.12	-1.7
3,691,472	+		PGA1_c35200	0.12	-0.5
3,691,480	-		PGA1_c35200	0.14	-0.8
3,691,488	-		PGA1_c35200	0.15	-0.2
3,691,600	-		PGA1_c35200	0.32	-0.1
3,691,645	-		PGA1_c35200	0.39	-1.0
3,691,689	+		PGA1_c35200	0.46	-1.1