Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32230

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
3,379,028	-		PGA1_c32220	0.36	+1.1
3,379,111	-		PGA1_c32220	0.41	-1.5
3,379,111	-		PGA1_c32220	0.41	+0.5
3,379,111	-		PGA1_c32220	0.41	-2.1
3,379,215	-		PGA1_c32220	0.48	+0.2
3,379,255	+		PGA1_c32220	0.51	-0.0
3,379,279	-		PGA1_c32220	0.52	+0.5
3,379,292	-		PGA1_c32220	0.53	+0.9
3,379,298	+		PGA1_c32220	0.53	-1.4
3,379,306	-		PGA1_c32220	0.54	+1.7
3,379,358	-		PGA1_c32220	0.57	-0.1
3,379,370	-		PGA1_c32220	0.58	-0.5
3,379,431	+		PGA1_c32220	0.62	+0.6
3,379,431	+		PGA1_c32220	0.62	+1.6
3,379,527	-		PGA1_c32220	0.69	-0.7
3,379,537	+		PGA1_c32220	0.69	-0.3
3,379,537	+		PGA1_c32220	0.69	-2.2
3,379,582	+		PGA1_c32220	0.72	-0.8
3,379,585	-		PGA1_c32220	0.72	-0.6
3,379,585	-		PGA1_c32220	0.72	-0.8
3,379,587	+		PGA1_c32220	0.72	-1.4
3,379,592	+		PGA1_c32220	0.73	-0.0
3,379,592	+		PGA1_c32220	0.73	-1.6
3,379,600	-		PGA1_c32220	0.73	-1.8
3,379,717	+		PGA1_c32220	0.81	+0.2
3,379,717	+		PGA1_c32220	0.81	-0.7
3,379,717	+		PGA1_c32220	0.81	-2.5
3,379,729	+		PGA1_c32220	0.82	+0.9
3,379,798	-		PGA1_c32220	0.86	-0.6
3,379,798	-		PGA1_c32220	0.86	-0.1
3,379,810	-		PGA1_c32220	0.87	+0.4
3,379,816	+		PGA1_c32220	0.88	-0.0
3,379,823	-		PGA1_c32220	0.88	-0.9
3,379,853	-				+1.3
3,379,959	+				-1.4
3,379,962	-				-0.1
3,379,997	+				+0.4
3,380,004	-				+0.4
3,380,005	-				-0.0
3,380,016	-				+1.0
3,380,021	-				+1.3
3,380,049	+		PGA1_c32230	0.13	+1.5
3,380,078	-		PGA1_c32230	0.20	+1.7
3,380,100	+		PGA1_c32230	0.26	+0.2
3,380,106	-		PGA1_c32230	0.27	+0.8
3,380,153	-		PGA1_c32230	0.39	+0.3
3,380,326	-		PGA1_c32230	0.84	-0.5
3,380,328	+		PGA1_c32230	0.84	+1.1
3,380,348	+		PGA1_c32230	0.89	+1.4
3,380,349	+		PGA1_c32230	0.90	-0.6
3,380,357	-				+0.2
3,380,689	-		PGA1_c32240	0.19	+0.0
3,380,699	-		PGA1_c32240	0.20	+2.4
3,380,699	-		PGA1_c32240	0.20	+1.3
3,380,699	-		PGA1_c32240	0.20	+0.6
3,380,725	-		PGA1_c32240	0.22	-1.5
3,380,751	+		PGA1_c32240	0.24	+0.2
3,380,760	+		PGA1_c32240	0.24	+1.2
3,380,760	+		PGA1_c32240	0.24	-0.3
3,380,862	+		PGA1_c32240	0.33	+0.9
3,380,894	+		PGA1_c32240	0.35	-2.3
3,380,902	-		PGA1_c32240	0.36	-1.2
3,381,037	+		PGA1_c32240	0.46	-1.1
3,381,040	-		PGA1_c32240	0.47	+1.3
3,381,066	+		PGA1_c32240	0.49	+1.4
3,381,066	+		PGA1_c32240	0.49	+1.0
3,381,066	+		PGA1_c32240	0.49	-2.3
3,381,081	+		PGA1_c32240	0.50	+0.6
3,381,089	-		PGA1_c32240	0.51	-0.0
3,381,134	-		PGA1_c32240	0.54	+1.4
3,381,153	-		PGA1_c32240	0.56	+0.0
3,381,188	+		PGA1_c32240	0.58	-1.7
3,381,209	+		PGA1_c32240	0.60	-0.3
3,381,304	+		PGA1_c32240	0.68	-0.6
3,381,312	-		PGA1_c32240	0.68	-0.0
3,381,312	-		PGA1_c32240	0.68	+1.7
3,381,312	-		PGA1_c32240	0.68	-0.7