Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30200

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
3,157,479	-				+0.0
3,157,741	-				+0.3
3,157,759	+				+0.7
3,157,764	+				+0.2
3,157,777	-				+0.4
3,157,777	-				-0.7
3,157,786	+				+0.9
3,157,805	+				+0.8
3,157,810	+				+0.4
3,157,813	-				+1.2
3,158,393	+				+0.1
3,158,415	+				+0.8
3,158,415	+				-1.1
3,158,415	+				-0.1
3,158,415	+				-1.1
3,158,415	+				-0.4
3,158,415	+				+0.6
3,158,415	+				+1.1
3,158,415	+				+0.0
3,158,415	+				-0.9
3,158,415	+				+0.9
3,158,415	+				-0.3
3,158,415	+				+0.6
3,158,415	+				+0.7
3,158,415	+				+0.7
3,158,415	+				-1.6
3,158,415	+				+0.2
3,158,415	+				-0.0
3,158,415	+				+1.4
3,158,415	+				+0.5
3,158,415	+				-0.9
3,158,415	+				+0.2
3,158,415	+				+0.3
3,158,415	+				+1.0
3,158,415	+				+0.2
3,158,415	+				-0.1
3,158,415	+				-1.5
3,158,415	+				-0.4
3,158,415	+				-0.3
3,158,415	+				+0.0
3,158,415	+				-0.4
3,158,415	+				+0.5
3,158,415	+				+0.9
3,158,415	+				-1.3
3,158,415	+				-0.5
3,158,423	-				+1.4
3,158,423	-				-1.2
3,158,423	-				-1.1
3,158,423	-				+0.1
3,158,423	-				+0.9
3,158,423	-				+0.8
3,158,423	-				+0.1
3,158,423	-				+0.1
3,158,423	-				+0.3
3,158,423	-				-2.2
3,158,423	-				-0.3
3,158,423	-				-0.2
3,158,423	-				+0.2
3,158,423	-				-1.0
3,158,423	-				+0.5
3,158,423	-				-0.8
3,158,423	-				-0.5
3,158,423	-				-0.3
3,158,423	-				-0.8
3,158,423	-				+1.1
3,158,423	-				-0.3
3,158,423	-				-0.8
3,158,423	-				+1.1
3,158,423	-				-1.5
3,158,423	-				+0.9
3,158,423	-				-0.5
3,158,423	-				+0.5
3,158,423	-				-0.4
3,158,423	-				-0.4
3,158,423	-				-0.3
3,158,470	+				-0.1
3,158,470	+				+0.3
3,158,560	+		PGA1_c30200	0.10	-0.5
3,158,609	-		PGA1_c30200	0.16	+0.9
3,158,616	+		PGA1_c30200	0.17	+0.3
3,158,616	+		PGA1_c30200	0.17	-0.3
3,158,636	+		PGA1_c30200	0.20	+1.0
3,158,707	+		PGA1_c30200	0.28	+1.0
3,158,715	-		PGA1_c30200	0.29	-0.2
3,158,718	+		PGA1_c30200	0.29	-1.1
3,158,763	+		PGA1_c30200	0.35	+0.6
3,158,763	+		PGA1_c30200	0.35	-1.0
3,158,770	-		PGA1_c30200	0.36	+0.3
3,158,771	-		PGA1_c30200	0.36	+0.5
3,158,771	-		PGA1_c30200	0.36	-1.0
3,158,804	-		PGA1_c30200	0.40	+1.0
3,158,867	+		PGA1_c30200	0.47	-0.1
3,158,876	+		PGA1_c30200	0.48	-0.2
3,158,947	+		PGA1_c30200	0.57	+1.3
3,158,947	-		PGA1_c30200	0.57	+1.4
3,159,097	+		PGA1_c30200	0.75	+0.3
3,159,100	+		PGA1_c30200	0.75	+0.9
3,159,146	-		PGA1_c30200	0.81	+1.0
3,159,146	-		PGA1_c30200	0.81	+0.9
3,159,175	+		PGA1_c30200	0.84	-0.1
3,159,188	-		PGA1_c30200	0.86	-0.5
3,159,220	-		PGA1_c30200	0.90	+0.8
3,159,241	-				-0.0
3,159,299	-				-0.3
3,159,389	+		PGA1_c30210	0.15	-0.6
3,159,416	+		PGA1_c30210	0.21	-0.4
3,159,416	+		PGA1_c30210	0.21	-0.6
3,159,416	+		PGA1_c30210	0.21	-0.2
3,159,443	+		PGA1_c30210	0.26	-0.3
3,159,449	+		PGA1_c30210	0.28	+0.9
3,159,451	-		PGA1_c30210	0.28	-0.2
3,159,451	-		PGA1_c30210	0.28	+1.1
3,159,465	-		PGA1_c30210	0.31	+1.2
3,159,465	-		PGA1_c30210	0.31	-3.1
3,159,471	-		PGA1_c30210	0.32	-0.1
3,159,513	-		PGA1_c30210	0.41	+0.9
3,159,536	+		PGA1_c30210	0.46	+0.6
3,159,544	-		PGA1_c30210	0.48	-1.4
3,159,568	+		PGA1_c30210	0.53	+0.9
3,159,568	+		PGA1_c30210	0.53	-0.8
3,159,568	+		PGA1_c30210	0.53	-2.3
3,159,568	+		PGA1_c30210	0.53	+0.6
3,159,568	+		PGA1_c30210	0.53	+0.3
3,159,571	+		PGA1_c30210	0.54	+0.1
3,159,576	-		PGA1_c30210	0.55	-1.8
3,159,576	-		PGA1_c30210	0.55	-0.1
3,159,576	-		PGA1_c30210	0.55	+1.2
3,159,576	-		PGA1_c30210	0.55	+0.1
3,159,576	-		PGA1_c30210	0.55	-2.0
3,159,576	-		PGA1_c30210	0.55	+1.3
3,159,579	-		PGA1_c30210	0.55	+1.0
3,159,663	+		PGA1_c30210	0.73	+0.4
3,159,663	+		PGA1_c30210	0.73	+0.2
3,159,671	-		PGA1_c30210	0.75	-0.5
3,159,679	+		PGA1_c30210	0.77	+0.3
3,159,697	+		PGA1_c30210	0.81	-0.1
3,159,699	+		PGA1_c30210	0.81	-1.7
3,159,774	-				+0.1
3,159,834	+				+1.4
3,159,839	-				+1.5
3,159,864	+				+0.8
3,159,878	-				+0.5
3,159,883	-				+1.9
3,159,910	+				-0.5
3,159,941	+				-0.6
3,159,956	+				-0.3
3,160,004	-		PGA1_c30220	0.15	+0.2
3,160,004	-		PGA1_c30220	0.15	-2.1
3,160,029	-		PGA1_c30220	0.17	+0.1
3,160,067	+		PGA1_c30220	0.21	-1.1
3,160,067	+		PGA1_c30220	0.21	+0.3
3,160,075	-		PGA1_c30220	0.22	-1.6
3,160,075	-		PGA1_c30220	0.22	-0.8
3,160,104	+		PGA1_c30220	0.25	+0.0
3,160,135	-		PGA1_c30220	0.28	-0.3
3,160,147	+		PGA1_c30220	0.29	+0.0
3,160,167	+		PGA1_c30220	0.31	-0.6
3,160,197	-		PGA1_c30220	0.34	-1.2
3,160,264	-		PGA1_c30220	0.41	+0.4
3,160,274	-		PGA1_c30220	0.42	+0.6
3,160,300	-		PGA1_c30220	0.44	+0.5