Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26570

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
2,769,245	+		PGA1_c26550	0.46	-0.8
2,769,245	+		PGA1_c26550	0.46	+1.3
2,769,245	+		PGA1_c26550	0.46	+2.3
2,769,245	+		PGA1_c26550	0.46	+0.1
2,769,253	-		PGA1_c26550	0.47	-1.2
2,769,253	-		PGA1_c26550	0.47	+0.9
2,769,255	+		PGA1_c26550	0.47	+0.6
2,769,289	+		PGA1_c26550	0.51	-0.2
2,769,293	+		PGA1_c26550	0.52	+0.7
2,769,355	+		PGA1_c26550	0.59	+0.7
2,769,410	+		PGA1_c26550	0.66	-0.3
2,769,418	-		PGA1_c26550	0.66	+0.5
2,769,583	+		PGA1_c26550	0.86	-0.1
2,769,592	-		PGA1_c26550	0.87	+0.3
2,769,663	+				-0.2
2,769,671	-				+0.4
2,769,759	+				-0.4
2,769,767	-				+0.7
2,769,767	-				-0.9
2,769,767	-				-0.0
2,769,767	-				+0.3
2,769,795	-				-0.8
2,769,812	-				+0.2
2,769,838	-		PGA1_c26560	0.10	+1.8
2,769,863	+		PGA1_c26560	0.16	+0.2
2,769,868	+		PGA1_c26560	0.17	+0.6
2,769,878	-		PGA1_c26560	0.20	-0.1
2,769,881	+		PGA1_c26560	0.20	+0.3
2,769,881	-		PGA1_c26560	0.20	-0.2
2,769,881	-		PGA1_c26560	0.20	-2.1
2,769,883	+		PGA1_c26560	0.21	-0.0
2,769,891	-		PGA1_c26560	0.23	-0.4
2,769,895	+		PGA1_c26560	0.24	-0.4
2,770,067	+		PGA1_c26560	0.66	+0.9
2,770,236	+				-1.7
2,770,239	-				-0.5
2,770,270	+				+1.6
2,770,304	+		PGA1_c26570	0.11	+0.7
2,770,316	+		PGA1_c26570	0.12	+1.8
2,770,375	+		PGA1_c26570	0.18	+0.0
2,770,383	-		PGA1_c26570	0.19	-0.0
2,770,383	-		PGA1_c26570	0.19	+0.4
2,770,383	-		PGA1_c26570	0.19	-1.6
2,770,384	-		PGA1_c26570	0.19	-0.2
2,770,417	-		PGA1_c26570	0.23	-0.3
2,770,516	+		PGA1_c26570	0.34	-0.4
2,770,633	+		PGA1_c26570	0.46	+0.3
2,770,633	+		PGA1_c26570	0.46	+0.6
2,770,638	+		PGA1_c26570	0.47	+1.4
2,770,638	+		PGA1_c26570	0.47	-0.2
2,770,638	+		PGA1_c26570	0.47	+0.5
2,770,639	+		PGA1_c26570	0.47	+0.6
2,770,646	-		PGA1_c26570	0.48	+0.1
2,770,668	-		PGA1_c26570	0.50	-0.3
2,770,758	-		PGA1_c26570	0.60	-0.4
2,770,818	-		PGA1_c26570	0.66	+0.4
2,770,847	-		PGA1_c26570	0.69	-1.1
2,770,847	-		PGA1_c26570	0.69	+0.4
2,770,914	-		PGA1_c26570	0.77	+1.6
2,770,937	+		PGA1_c26570	0.79	+0.4
2,770,991	+		PGA1_c26570	0.85	+0.4
2,770,999	-		PGA1_c26570	0.86	+0.7
2,771,011	-		PGA1_c26570	0.87	+2.4
2,771,117	+				+0.2
2,771,177	-				-0.7
2,771,182	-				+0.7
2,771,193	-				+1.6
2,771,208	+				-0.4
2,771,239	+				-2.9
2,771,333	+				-1.2
2,771,423	+				+0.2
2,771,423	+				+0.2
2,771,423	+				+0.8
2,771,423	+				-0.7
2,771,431	-				-1.0
2,771,431	-				-1.4
2,771,431	-				+0.4
2,771,431	-				-2.7
2,771,431	-				-0.0
2,771,431	-				-0.4
2,771,431	-				-0.4
2,771,431	-				+0.3
2,771,431	-				-0.4
2,771,431	-				+0.4
2,771,443	+				-1.4
2,771,451	-				-1.1
2,771,451	-				+0.8
2,771,451	-				-1.1
2,771,451	-				+0.5
2,771,451	-				-0.0
2,771,511	+				-0.0
2,771,814	+				+0.9
2,771,814	-				-0.4
2,771,877	-				-0.3
2,771,881	-				-0.7
2,771,965	+		PGA1_c26580	0.15	-0.0
2,771,998	-		PGA1_c26580	0.17	+1.0
2,772,039	-		PGA1_c26580	0.19	-1.8
2,772,039	-		PGA1_c26580	0.19	+0.1
2,772,058	+		PGA1_c26580	0.20	+0.5
2,772,058	+		PGA1_c26580	0.20	-0.1
2,772,061	-		PGA1_c26580	0.21	-0.8
2,772,066	-		PGA1_c26580	0.21	-1.2
2,772,066	-		PGA1_c26580	0.21	-1.0
2,772,077	-		PGA1_c26580	0.21	+0.9