Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14190

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
1,473,047	+		PGA1_c14180	0.71	+1.0
1,473,047	+		PGA1_c14180	0.71	+0.4
1,473,055	-		PGA1_c14180	0.71	-0.2
1,473,060	-		PGA1_c14180	0.71	-1.4
1,473,080	-		PGA1_c14180	0.72	+1.6
1,473,080	-		PGA1_c14180	0.72	+0.5
1,473,105	-		PGA1_c14180	0.74	-1.1
1,473,161	+		PGA1_c14180	0.77	+0.8
1,473,186	+		PGA1_c14180	0.79	-1.9
1,473,270	-		PGA1_c14180	0.84	+1.1
1,473,284	-		PGA1_c14180	0.85	-1.1
1,473,285	+		PGA1_c14180	0.85	+1.2
1,473,285	+		PGA1_c14180	0.85	-0.1
1,473,285	+		PGA1_c14180	0.85	-0.7
1,473,285	+		PGA1_c14180	0.85	-0.9
1,473,285	+		PGA1_c14180	0.85	-0.4
1,473,285	+		PGA1_c14180	0.85	+0.6
1,473,285	+		PGA1_c14180	0.85	-0.5
1,473,293	-		PGA1_c14180	0.85	+1.5
1,473,293	-		PGA1_c14180	0.85	-0.3
1,473,293	-		PGA1_c14180	0.85	+0.9
1,473,293	-		PGA1_c14180	0.85	-0.9
1,473,293	-		PGA1_c14180	0.85	+0.3
1,473,293	-		PGA1_c14180	0.85	+0.1
1,473,293	-		PGA1_c14180	0.85	+0.1
1,473,295	-		PGA1_c14180	0.85	-0.9
1,473,311	+		PGA1_c14180	0.86	-0.0
1,473,420	-				+0.6
1,473,426	-				-0.4
1,473,482	+				-0.6
1,473,515	-				-0.3
1,473,546	+				+1.2
1,473,588	+				+0.3
1,473,593	+				+0.9
1,473,593	+				+0.3
1,473,593	+				-0.3
1,473,593	+				+0.4
1,473,672	+				+0.0
1,473,781	-				-0.3
1,473,874	+				-1.4
1,473,882	-				+0.6
1,473,882	-				-0.6
1,473,882	-				+0.7
1,473,887	-				+0.4
1,474,018	+				+0.6
1,474,018	+				+0.6
1,474,018	+				+1.2
1,474,026	-				-0.2
1,474,026	-				-0.1
1,474,055	-		PGA1_c14190	0.13	+1.2
1,474,085	+		PGA1_c14190	0.17	+0.6
1,474,093	-		PGA1_c14190	0.18	+0.8
1,474,093	-		PGA1_c14190	0.18	-0.0
1,474,114	+		PGA1_c14190	0.20	-0.1
1,474,150	+		PGA1_c14190	0.24	+0.9
1,474,199	+		PGA1_c14190	0.30	+1.3
1,474,220	+		PGA1_c14190	0.33	+1.0
1,474,264	+		PGA1_c14190	0.38	-0.1
1,474,264	+		PGA1_c14190	0.38	+1.4
1,474,272	-		PGA1_c14190	0.39	-1.1
1,474,272	-				+1.4
1,474,309	+		PGA1_c14190	0.44	+2.2
1,474,317	-		PGA1_c14190	0.45	+0.7
1,474,360	+		PGA1_c14190	0.50	+1.2
1,474,401	-		PGA1_c14190	0.55	-0.2
1,474,420	+		PGA1_c14190	0.57	+0.1
1,474,452	-		PGA1_c14190	0.61	+1.0
1,474,502	+		PGA1_c14190	0.67	+0.2
1,474,510	-		PGA1_c14190	0.68	+1.1
1,474,519	+		PGA1_c14190	0.69	-0.9
1,474,519	+		PGA1_c14190	0.69	-0.1
1,474,593	+		PGA1_c14190	0.78	+1.2
1,474,601	-		PGA1_c14190	0.79	+2.7
1,474,601	-		PGA1_c14190	0.79	-0.9
1,474,634	+		PGA1_c14190	0.83	+0.6
1,474,635	+		PGA1_c14190	0.83	+0.2
1,474,697	+				+0.1
1,474,743	-				+1.2
1,474,778	+				-0.0
1,474,784	+				-0.6
1,474,792	-				+0.3
1,474,797	-				+2.0
1,474,896	-				+0.4
1,474,896	-				+0.4
1,474,974	-				-0.5
1,474,974	-				+1.4
1,475,006	-				-0.7
1,475,020	+				-0.9
1,475,042	+				+0.0