Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13410

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
1,384,251	+				-0.7
1,384,251	+				-0.6
1,384,259	-				+0.9
1,384,261	+				+0.2
1,384,293	+				-0.1
1,384,432	+				+0.3
1,384,813	-		PGA1_c13400	0.57	+1.1
1,384,838	+		PGA1_c13400	0.60	-0.4
1,384,968	+		PGA1_c13400	0.77	-2.7
1,384,971	-		PGA1_c13400	0.77	-1.0
1,384,982	+		PGA1_c13400	0.79	-2.0
1,384,990	-		PGA1_c13400	0.80	-2.2
1,385,008	+		PGA1_c13400	0.82	-0.7
1,385,076	+				+0.3
1,385,304	-		PGA1_c13410	0.25	+1.5
1,385,311	-		PGA1_c13410	0.28	-0.5
1,385,396	+		PGA1_c13410	0.64	+0.5
1,385,488	+				-0.8
1,385,496	-				-1.4
1,385,730	+		PGA1_c13420	0.38	+0.6
1,386,103	+				+1.1
1,386,126	+				-0.0
1,386,199	+				-0.2
1,386,390	-		PGA1_c13430	0.12	-0.5