Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2478

Experiment: BG11 with Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.0625 mg/ml
2,558,562	-				+0.0
2,558,615	+				-0.4
2,558,657	-				-0.2
2,558,703	+	sulA	Synpcc7942_2477	0.13	+0.7
2,558,705	+	sulA	Synpcc7942_2477	0.13	-0.2
2,558,705	+	sulA	Synpcc7942_2477	0.13	-0.9
2,558,713	-	sulA	Synpcc7942_2477	0.14	+0.6
2,558,713	-	sulA	Synpcc7942_2477	0.14	-1.7
2,558,713	-	sulA	Synpcc7942_2477	0.14	+1.1
2,558,713	-	sulA	Synpcc7942_2477	0.14	-1.3
2,558,713	-	sulA	Synpcc7942_2477	0.14	+0.5
2,558,756	+	sulA	Synpcc7942_2477	0.19	-0.1
2,558,764	-	sulA	Synpcc7942_2477	0.20	+0.8
2,558,781	-	sulA	Synpcc7942_2477	0.22	-2.0
2,558,783	+	sulA	Synpcc7942_2477	0.22	-0.4
2,558,786	-				+2.0
2,558,791	-	sulA	Synpcc7942_2477	0.23	-0.4
2,558,878	-	sulA	Synpcc7942_2477	0.32	-1.3
2,558,886	-	sulA	Synpcc7942_2477	0.33	+0.0
2,558,895	-	sulA	Synpcc7942_2477	0.34	-0.4
2,558,928	+	sulA	Synpcc7942_2477	0.38	+0.0
2,558,954	-	sulA	Synpcc7942_2477	0.41	-0.2
2,558,954	-	sulA	Synpcc7942_2477	0.41	-1.8
2,559,025	+	sulA	Synpcc7942_2477	0.49	-0.3
2,559,025	+	sulA	Synpcc7942_2477	0.49	+0.2
2,559,027	+	sulA	Synpcc7942_2477	0.49	-0.3
2,559,074	+	sulA	Synpcc7942_2477	0.54	+0.4
2,559,080	-	sulA	Synpcc7942_2477	0.55	-0.2
2,559,090	+	sulA	Synpcc7942_2477	0.56	-2.3
2,559,098	-	sulA	Synpcc7942_2477	0.57	-0.8
2,559,158	+	sulA	Synpcc7942_2477	0.64	-1.0
2,559,160	-	sulA	Synpcc7942_2477	0.64	+0.1
2,559,166	+	sulA	Synpcc7942_2477	0.64	-1.2
2,559,180	-	sulA	Synpcc7942_2477	0.66	-1.6
2,559,192	-	sulA	Synpcc7942_2477	0.67	-0.8
2,559,238	+	sulA	Synpcc7942_2477	0.72	+0.4
2,559,287	+	sulA	Synpcc7942_2477	0.78	-0.8
2,559,314	-	sulA	Synpcc7942_2477	0.81	-1.7
2,559,314	-	sulA	Synpcc7942_2477	0.81	-0.3
2,559,316	+	sulA	Synpcc7942_2477	0.81	+1.0
2,559,316	-	sulA	Synpcc7942_2477	0.81	+0.5
2,559,324	-	sulA	Synpcc7942_2477	0.82	-1.6
2,559,352	-	sulA	Synpcc7942_2477	0.85	+0.2
2,559,406	+				-1.2
2,559,406	+				-1.6
2,559,414	-				+2.0
2,559,414	-				-2.5
2,559,415	-				-1.8
2,559,420	+				-0.2
2,559,428	-				+2.2
2,559,435	+				+0.1
2,559,487	-				-1.1
2,559,487	-				-2.1
2,559,505	-				-1.8
2,559,580	+	psb28-2	Synpcc7942_2478	0.21	+0.2
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	+1.8
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	+0.0
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	+0.2
2,559,614	+	psb28-2	Synpcc7942_2478	0.30	+0.0
2,559,622	-	psb28-2	Synpcc7942_2478	0.33	-0.1
2,559,649	+	psb28-2	Synpcc7942_2478	0.40	-0.4
2,559,649	+	psb28-2	Synpcc7942_2478	0.40	+0.1
2,559,657	-	psb28-2	Synpcc7942_2478	0.42	+0.1
2,559,668	+	psb28-2	Synpcc7942_2478	0.45	+0.1
2,559,697	+	psb28-2	Synpcc7942_2478	0.53	+0.3
2,559,737	-	psb28-2	Synpcc7942_2478	0.63	-0.8
2,559,754	+	psb28-2	Synpcc7942_2478	0.68	+0.4
2,559,767	+	psb28-2	Synpcc7942_2478	0.71	+0.5
2,559,767	+	psb28-2	Synpcc7942_2478	0.71	-0.1
2,559,767	+	psb28-2	Synpcc7942_2478	0.71	+0.8
2,559,780	-	psb28-2	Synpcc7942_2478	0.75	+0.7
2,559,815	-	psb28-2	Synpcc7942_2478	0.84	-0.4
2,559,836	+	psb28-2	Synpcc7942_2478	0.90	+0.2
2,559,852	+				+0.2
2,559,852	+				-0.2
2,559,860	-				+0.4
2,559,882	+				+0.3
2,559,890	-				-2.0
2,559,898	+				+0.1
2,559,898	+				+0.8
2,559,900	-				-1.0
2,560,027	+				+1.0
2,560,027	+				-2.0
2,560,033	-				-0.4
2,560,107	-				+1.0
2,560,119	+				-0.1
2,560,127	-				-2.0
2,560,127	-				+0.7
2,560,196	-				+0.2
2,560,306	-				+0.4
2,560,322	+				-0.7
2,560,325	-				+0.2
2,560,353	+				-0.2
2,560,417	-				+2.6
2,560,435	+				+0.4
2,560,443	-		Synpcc7942_2479	0.12	+1.4
2,560,527	+		Synpcc7942_2479	0.27	+4.3
2,560,527	+		Synpcc7942_2479	0.27	+4.1
2,560,533	-		Synpcc7942_2479	0.28	+3.8
2,560,579	+		Synpcc7942_2479	0.36	+3.7
2,560,582	-		Synpcc7942_2479	0.37	+3.7
2,560,662	-		Synpcc7942_2479	0.51	+3.8
2,560,671	+		Synpcc7942_2479	0.52	+4.3
2,560,711	+		Synpcc7942_2479	0.59	+3.3
2,560,721	+		Synpcc7942_2479	0.61	+4.7
2,560,729	-		Synpcc7942_2479	0.62	+4.1
2,560,786	-		Synpcc7942_2479	0.72	+3.8
2,560,855	+		Synpcc7942_2479	0.85	+4.2