Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c36250

Experiment: m.b. acetate 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. acetate 100 mM
3,791,498	+		PGA1_c36240	0.23	+0.8
3,791,513	+		PGA1_c36240	0.24	-0.5
3,791,513	+		PGA1_c36240	0.24	-2.0
3,791,513	+		PGA1_c36240	0.24	+0.7
3,791,513	+		PGA1_c36240	0.24	-0.3
3,791,521	-		PGA1_c36240	0.25	-1.9
3,791,521	-		PGA1_c36240	0.25	+0.9
3,791,521	-		PGA1_c36240	0.25	-0.1
3,791,521	-		PGA1_c36240	0.25	-0.4
3,791,538	+		PGA1_c36240	0.26	-0.1
3,791,617	-		PGA1_c36240	0.33	-0.8
3,791,624	+		PGA1_c36240	0.34	+0.3
3,791,635	-		PGA1_c36240	0.35	+0.4
3,791,643	-		PGA1_c36240	0.35	+1.4
3,791,673	-		PGA1_c36240	0.38	-0.4
3,791,684	+		PGA1_c36240	0.39	+1.0
3,791,803	+		PGA1_c36240	0.49	+0.9
3,791,817	+		PGA1_c36240	0.50	+0.9
3,791,863	+		PGA1_c36240	0.54	+1.2
3,791,893	+		PGA1_c36240	0.56	+1.6
3,791,916	-		PGA1_c36240	0.58	-0.8
3,791,986	+		PGA1_c36240	0.64	-2.2
3,791,994	-		PGA1_c36240	0.65	+1.3
3,791,994	-		PGA1_c36240	0.65	+0.2
3,792,042	+		PGA1_c36240	0.69	+0.4
3,792,050	+		PGA1_c36240	0.70	-0.2
3,792,050	-		PGA1_c36240	0.70	+0.9
3,792,050	-		PGA1_c36240	0.70	+1.6
3,792,050	-		PGA1_c36240	0.70	+1.4
3,792,089	+		PGA1_c36240	0.73	-0.4
3,792,101	-		PGA1_c36240	0.74	-0.7
3,792,150	-		PGA1_c36240	0.78	-1.8
3,792,150	-		PGA1_c36240	0.78	-0.8
3,792,326	+				+1.2
3,792,363	+				-0.3
3,792,371	-				-1.9
3,792,378	-				-3.0
3,792,417	+				-0.1
3,792,425	-				+0.3
3,792,427	+				+0.0
3,792,427	+				-1.6
3,792,427	+				-0.7
3,792,428	+				-1.4
3,792,428	+				+0.9
3,792,435	-				-0.5
3,792,436	-				-0.2
3,792,465	+				-0.4
3,792,499	-				-0.5
3,792,499	-				-0.5
3,792,505	-				+1.0
3,792,542	-				-0.9
3,792,557	+				-0.8
3,792,557	+				+0.2
3,792,557	+				+0.7
3,792,557	+				+0.5
3,792,565	-				-0.5
3,792,565	-				+0.8
3,792,565	-				+1.7
3,792,565	-				+0.6
3,792,596	+		PGA1_c36250	0.12	+0.7
3,792,596	+		PGA1_c36250	0.12	+0.6
3,792,596	+		PGA1_c36250	0.12	+0.7
3,792,596	+		PGA1_c36250	0.12	+0.6
3,792,633	+		PGA1_c36250	0.15	+0.1
3,792,634	-		PGA1_c36250	0.16	-0.8
3,792,641	-		PGA1_c36250	0.16	+2.0
3,792,647	-		PGA1_c36250	0.17	+0.5
3,792,648	-		PGA1_c36250	0.17	-0.2
3,792,692	-		PGA1_c36250	0.20	+0.7
3,792,697	-		PGA1_c36250	0.21	+2.1
3,792,697	-		PGA1_c36250	0.21	-0.4
3,792,738	-		PGA1_c36250	0.24	-0.2
3,792,803	-		PGA1_c36250	0.29	-0.2
3,792,862	-		PGA1_c36250	0.34	+1.1
3,792,902	+		PGA1_c36250	0.37	+0.7
3,792,902	+		PGA1_c36250	0.37	+0.5
3,792,917	+		PGA1_c36250	0.38	+0.7
3,792,917	+		PGA1_c36250	0.38	+0.1
3,792,917	+		PGA1_c36250	0.38	+0.2
3,792,917	+		PGA1_c36250	0.38	+1.1
3,792,917	+		PGA1_c36250	0.38	+0.3
3,792,941	-		PGA1_c36250	0.40	+0.2
3,792,951	+		PGA1_c36250	0.41	-1.7
3,792,951	+		PGA1_c36250	0.41	+0.5
3,792,951	+		PGA1_c36250	0.41	+0.4
3,792,959	-		PGA1_c36250	0.42	-2.4
3,792,959	-		PGA1_c36250	0.42	+1.1
3,792,959	-		PGA1_c36250	0.42	+1.3
3,792,962	+		PGA1_c36250	0.42	+0.8
3,792,970	-		PGA1_c36250	0.43	+0.5
3,793,003	+		PGA1_c36250	0.45	-2.0
3,793,003	+		PGA1_c36250	0.45	+0.0
3,793,011	-		PGA1_c36250	0.46	+0.9
3,793,025	+		PGA1_c36250	0.47	-1.3
3,793,025	+		PGA1_c36250	0.47	-2.3
3,793,033	-		PGA1_c36250	0.48	+0.4
3,793,033	-		PGA1_c36250	0.48	+0.0
3,793,067	+		PGA1_c36250	0.50	+0.8
3,793,146	+		PGA1_c36250	0.57	+1.2
3,793,157	+		PGA1_c36250	0.58	-1.2
3,793,163	+		PGA1_c36250	0.58	-0.9
3,793,163	+		PGA1_c36250	0.58	-0.5
3,793,164	-		PGA1_c36250	0.58	+1.4
3,793,165	-		PGA1_c36250	0.58	+0.9
3,793,165	-		PGA1_c36250	0.58	+2.8
3,793,171	-		PGA1_c36250	0.59	-0.0
3,793,178	-		PGA1_c36250	0.59	+0.2
3,793,182	+		PGA1_c36250	0.60	-0.0
3,793,182	+		PGA1_c36250	0.60	+0.0
3,793,190	-		PGA1_c36250	0.60	+1.1
3,793,190	-		PGA1_c36250	0.60	-1.0
3,793,190	-		PGA1_c36250	0.60	+1.2
3,793,205	+		PGA1_c36250	0.62	+0.3
3,793,225	+		PGA1_c36250	0.63	-0.8
3,793,226	+		PGA1_c36250	0.63	+1.6
3,793,233	+		PGA1_c36250	0.64	-0.8
3,793,243	-		PGA1_c36250	0.65	-1.4
3,793,247	+		PGA1_c36250	0.65	+0.4
3,793,248	+		PGA1_c36250	0.65	+1.0
3,793,263	+		PGA1_c36250	0.66	-2.2
3,793,271	+		PGA1_c36250	0.67	+0.0
3,793,271	-		PGA1_c36250	0.67	+2.6
3,793,281	+		PGA1_c36250	0.68	+0.8
3,793,283	-		PGA1_c36250	0.68	+0.4
3,793,331	+		PGA1_c36250	0.72	+2.2
3,793,334	-		PGA1_c36250	0.72	+0.4
3,793,373	+		PGA1_c36250	0.75	-0.1
3,793,373	+		PGA1_c36250	0.75	+0.4
3,793,383	+		PGA1_c36250	0.76	+0.4
3,793,397	-		PGA1_c36250	0.77	-0.5
3,793,398	-		PGA1_c36250	0.77	-0.6
3,793,407	+		PGA1_c36250	0.78	+0.6
3,793,407	+		PGA1_c36250	0.78	-0.5
3,793,419	+		PGA1_c36250	0.79	-1.1
3,793,419	+		PGA1_c36250	0.79	+0.6
3,793,421	-		PGA1_c36250	0.79	-0.1
3,793,427	-		PGA1_c36250	0.79	-0.6
3,793,427	-		PGA1_c36250	0.79	+1.4
3,793,427	-		PGA1_c36250	0.79	+1.1
3,793,444	+		PGA1_c36250	0.81	-0.1
3,793,488	+		PGA1_c36250	0.84	+0.2
3,793,488	+		PGA1_c36250	0.84	-1.8
3,793,507	-		PGA1_c36250	0.86	-1.2
3,793,512	+		PGA1_c36250	0.86	-2.4
3,793,520	-		PGA1_c36250	0.87	-0.5
3,793,525	+		PGA1_c36250	0.87	-0.2
3,793,531	-		PGA1_c36250	0.88	+0.2
3,793,533	-		PGA1_c36250	0.88	+0.3
3,793,533	-		PGA1_c36250	0.88	+1.5
3,793,541	+		PGA1_c36250	0.89	+0.8
3,793,556	+		PGA1_c36250	0.90	-1.7
3,793,556	+		PGA1_c36250	0.90	-0.1
3,793,556	+		PGA1_c36250	0.90	+1.4
3,793,556	+		PGA1_c36250	0.90	-1.8
3,793,556	+		PGA1_c36250	0.90	-2.0
3,793,556	+		PGA1_c36250	0.90	+0.5
3,793,558	-				+0.0
3,793,558	-				-0.4
3,793,558	-				+1.1
3,793,564	-				-0.3
3,793,568	+				-0.2
3,793,568	+				-1.4
3,793,568	+				+0.9
3,793,568	+				+2.2
3,793,568	+				-0.8
3,793,568	+				-0.2
3,793,568	+				+0.2
3,793,568	+				-0.9
3,793,568	+				+0.9
3,793,568	+				-0.7
3,793,568	+				+0.5
3,793,568	+				-0.1
3,793,568	+				+3.0
3,793,568	+				-0.2
3,793,568	+				+0.6
3,793,575	+				-0.4
3,793,575	+				-1.0
3,793,576	-				+0.6
3,793,576	-				+0.1
3,793,576	-				+0.3
3,793,576	-				-1.1
3,793,576	-				-0.3
3,793,576	-				+0.4
3,793,576	-				+0.5
3,793,576	-				-0.1
3,793,576	-				+0.2
3,793,581	+				-0.4
3,793,581	+				+0.2
3,793,582	-				+0.4
3,793,582	-				-1.0
3,793,589	-				-1.6
3,793,645	+				-0.4
3,793,645	+				-0.4
3,793,646	+				+0.5
3,793,647	+				+0.2
3,793,653	-				+0.4
3,793,653	-				+0.4
3,793,655	-				+0.6
3,793,655	-				-0.9
3,793,655	-				-2.3
3,793,663	-				+0.4
3,793,663	-				-0.8
3,793,673	+				-1.5
3,793,673	+				-0.7
3,793,673	+				+0.2
3,793,673	-				+0.1
3,793,675	+				+0.2
3,793,675	+				+0.0
3,793,675	+				-0.4
3,793,681	-				+1.5
3,793,681	-				+0.6
3,793,681	-				-0.4
3,793,682	+				-0.0
3,793,683	-				-1.6
3,793,688	-				-1.2
3,793,688	-				+0.8
3,793,689	+				+0.4
3,793,690	+				-0.7
3,793,694	+				+0.7
3,793,695	-				+1.4
3,793,697	-				-0.5
3,793,698	-				+0.6
3,793,702	-				+1.2
3,793,702	-				-0.4
3,793,702	-				-0.4
3,793,702	-				+2.5
3,793,702	-				+0.6
3,793,704	+				+0.3
3,793,704	+				+0.2
3,793,704	+				+1.2
3,793,704	+				+0.3
3,793,704	+				-0.5
3,793,704	+				-1.2
3,793,704	+				-0.8
3,793,704	+				+0.0
3,793,704	+				-1.0
3,793,704	+				-1.4
3,793,704	+				-0.3
3,793,704	+				+0.1
3,793,704	+				+0.6
3,793,705	+				-0.1
3,793,705	+				-0.5
3,793,705	+				-1.0
3,793,712	-				-0.1
3,793,712	-				-0.1
3,793,712	-				-0.2
3,793,712	-				-1.1
3,793,712	-				-2.4
3,793,712	-				-0.5
3,793,712	-				-1.2
3,793,712	-				+1.4
3,793,713	-				-0.6
3,793,713	-				+1.0
3,793,713	-				+1.9
3,793,713	-				+0.8
3,793,714	-				-0.5
3,793,718	-				-0.7
3,793,753	-				-1.2
3,793,764	+				-0.4
3,793,764	+				+0.2
3,793,764	+				-0.1
3,793,764	+				+0.3
3,793,764	+				+0.6
3,793,764	+				-0.8
3,793,764	+				-1.7
3,793,764	+				+0.8
3,793,764	+				+1.2
3,793,764	+				-0.2
3,793,772	-				-1.0
3,793,772	-				+0.6
3,793,772	-				-0.5
3,793,772	-				-0.2
3,793,772	-				-0.4
3,793,772	-				-1.5
3,793,772	-				+0.2
3,793,772	-				-0.8
3,793,772	-				+1.4
3,793,773	+				+0.4
3,793,773	+				-0.5
3,793,773	+				-1.2
3,793,773	+				+0.3
3,793,773	+				+0.6
3,793,773	-				-0.6
3,793,773	-				-1.4
3,793,777	+				+0.3
3,793,781	-				-0.2
3,793,782	+				+0.3
3,793,783	+				-0.1
3,793,783	+				+0.6
3,793,791	+				-0.5
3,793,791	+				-0.0
3,793,791	-				-0.6
3,793,791	-				+0.8
3,793,791	-				-0.0
3,793,796	+				-0.2
3,793,796	+				+0.6
3,793,796	+				-0.3
3,793,796	+				+1.5
3,793,796	+				-1.5
3,793,796	+				+0.2
3,793,801	+				-0.0
3,793,801	+				-0.0
3,793,801	+				+0.9
3,793,801	+				+1.3
3,793,801	+				+1.0
3,793,801	+				-0.5
3,793,801	+				-0.1
3,793,801	+				+2.2
3,793,801	+				+1.4
3,793,801	+				+0.7
3,793,801	+				+0.1
3,793,801	+				-2.9
3,793,801	+				-1.4
3,793,801	+				-0.4
3,793,801	+				-1.8
3,793,801	+				-1.6
3,793,801	+				+0.3
3,793,801	+				+0.1
3,793,801	+				-2.9
3,793,801	+				+0.2
3,793,804	+				+1.0
3,793,804	-				+1.2
3,793,804	-				-0.6
3,793,804	-				-0.4
3,793,804	-				-0.6
3,793,804	-				+0.2
3,793,804	-				+0.7
3,793,804	-				+2.0
3,793,804	-				+0.2
3,793,806	+				+2.0
3,793,806	+				+0.5
3,793,806	+				-1.4
3,793,806	+				-0.1
3,793,806	+				-1.1
3,793,806	+				+0.5
3,793,806	+				-1.5
3,793,806	+				-1.0
3,793,806	+				+0.6
3,793,806	+				+0.2
3,793,806	+				-0.2
3,793,806	+				+0.4
3,793,806	+				+1.0
3,793,806	+				+1.4
3,793,806	+				+0.4
3,793,806	+				+0.0
3,793,806	+				-0.4
3,793,806	+				+0.4
3,793,806	+				+1.1
3,793,806	+				-1.2
3,793,806	+				-0.6
3,793,806	+				-0.8
3,793,806	+				-1.0
3,793,806	+				-0.3
3,793,806	+				+1.2
3,793,806	+				-1.0
3,793,806	+				+0.2
3,793,809	-				-0.2
3,793,809	-				+0.2
3,793,809	-				-0.0
3,793,809	-				-1.0
3,793,809	-				+0.4
3,793,809	-				+0.9
3,793,809	-				+1.6
3,793,809	-				-1.0
3,793,809	-				-1.5
3,793,809	-				-0.1
3,793,809	-				+0.9
3,793,809	-				+0.3
3,793,809	-				-0.4
3,793,809	-				-0.8
3,793,809	-				-0.8
3,793,809	-				+0.4
3,793,809	-				-0.1
3,793,809	-				-0.6
3,793,809	-				-0.5
3,793,814	-				+1.2
3,793,814	-				-0.6
3,793,814	-				+0.2
3,793,814	-				+0.2
3,793,814	-				+1.4
3,793,814	-				-1.2
3,793,814	-				-0.8
3,793,814	-				-1.6
3,793,814	-				+0.6
3,793,814	-				+1.5
3,793,814	-				-2.0
3,793,814	-				-0.7
3,793,814	-				+1.1
3,793,814	-				-1.4
3,793,814	-				-0.6
3,793,814	-				-1.9
3,793,814	-				+0.2
3,793,814	-				+0.5
3,793,814	-				-0.2
3,793,814	-				+0.9
3,793,814	-				-0.5
3,793,814	-				-0.1
3,793,814	-				-0.0
3,793,814	-				-0.3
3,793,814	-				+0.2
3,793,814	-				+0.4
3,793,814	-				+0.0
3,793,814	-				-0.0
3,793,814	-				+0.2
3,793,814	-				+0.9
3,793,814	-				-0.6
3,793,814	-				-1.2
3,793,814	-				+1.2
3,793,814	-				-0.0
3,793,868	+				-1.4
3,793,868	+				-0.5
3,793,876	+				+0.2
3,793,876	-				-0.2
3,793,876	-				+0.8
3,793,882	-				+3.1
3,793,883	+				-1.6
3,793,883	+				+0.0
3,793,883	+				+0.4
3,793,883	+				-1.1
3,793,883	+				-0.3
3,793,883	+				+0.8
3,793,883	+				-0.0
3,793,883	+				+0.3
3,793,883	+				+0.1
3,793,883	+				+0.8
3,793,883	+				-0.0
3,793,883	+				+1.1
3,793,883	+				+0.4
3,793,883	+				+0.1
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