Experiment: m.b. acetate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c21810 and PGA1_c21820 are separated by 116 nucleotides PGA1_c21820 and PGA1_c21830 are separated by 60 nucleotides
PGA1_c21810: PGA1_c21810 - metallophosphoesterase, MG_246/BB_0505 family, at 2,262,928 to 2,263,740
_c21810
PGA1_c21820: PGA1_c21820 - 5-formyltetrahydrofolate cycloligase-like protein, at 2,263,857 to 2,264,420
_c21820
PGA1_c21830: PGA1_c21830 - magnesium transporter MgtE, at 2,264,481 to 2,265,869
_c21830
Position (kb)
2263
2264
2265 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2262.858 kb on + strand at 2262.858 kb on + strand at 2262.863 kb on + strand at 2262.863 kb on + strand at 2262.863 kb on + strand at 2262.866 kb on - strand at 2262.871 kb on - strand at 2262.871 kb on - strand at 2262.917 kb on - strand at 2262.926 kb on + strand at 2262.941 kb on - strand at 2263.200 kb on + strand, within PGA1_c21810 at 2263.798 kb on - strand at 2263.851 kb on - strand at 2263.851 kb on - strand at 2263.856 kb on - strand at 2263.869 kb on - strand at 2263.869 kb on - strand at 2263.874 kb on + strand at 2263.899 kb on + strand at 2263.997 kb on + strand, within PGA1_c21820 at 2264.005 kb on - strand, within PGA1_c21820 at 2264.059 kb on - strand, within PGA1_c21820 at 2264.073 kb on + strand, within PGA1_c21820 at 2264.190 kb on - strand, within PGA1_c21820 at 2264.190 kb on - strand, within PGA1_c21820 at 2264.268 kb on - strand, within PGA1_c21820 at 2264.359 kb on + strand, within PGA1_c21820 at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.395 kb on + strand at 2264.403 kb on - strand at 2264.403 kb on - strand at 2264.403 kb on - strand at 2264.403 kb on - strand at 2264.405 kb on + strand at 2264.413 kb on - strand at 2264.413 kb on - strand at 2264.413 kb on - strand at 2264.431 kb on + strand at 2264.435 kb on - strand at 2264.435 kb on - strand at 2264.482 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 100 mM remove 2,262,858 + +0.2 2,262,858 + -2.2 2,262,863 + +0.1 2,262,863 + +0.9 2,262,863 + -1.0 2,262,866 - +0.6 2,262,871 - +0.3 2,262,871 - -0.8 2,262,917 - +0.1 2,262,926 + -0.6 2,262,941 - -0.2 2,263,200 + PGA1_c21810 0.33 +0.2 2,263,798 - -0.7 2,263,851 - +0.7 2,263,851 - -1.3 2,263,856 - +1.8 2,263,869 - -1.1 2,263,869 - +0.1 2,263,874 + +1.3 2,263,899 + -0.1 2,263,997 + PGA1_c21820 0.25 +0.8 2,264,005 - PGA1_c21820 0.26 +1.5 2,264,059 - PGA1_c21820 0.36 -0.7 2,264,073 + PGA1_c21820 0.38 -0.2 2,264,190 - PGA1_c21820 0.59 +0.5 2,264,190 - PGA1_c21820 0.59 -0.8 2,264,268 - PGA1_c21820 0.73 -0.6 2,264,359 + PGA1_c21820 0.89 +1.2 2,264,395 + +0.8 2,264,395 + -0.7 2,264,395 + +0.5 2,264,395 + +0.9 2,264,395 + -0.1 2,264,395 + +0.1 2,264,395 + -0.2 2,264,395 + -0.2 2,264,395 + -1.1 2,264,395 + -0.6 2,264,395 + +0.6 2,264,403 - -0.7 2,264,403 - -0.1 2,264,403 - +0.8 2,264,403 - -0.4 2,264,405 + -1.2 2,264,413 - -0.5 2,264,413 - +0.8 2,264,413 - +0.8 2,264,431 + -1.4 2,264,435 - -0.3 2,264,435 - +0.3 2,264,482 - +0.0
Or see this region's nucleotide sequence