Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_17600

Experiment: 20 mM putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	20 mM putrescine
3,963,396	+		AO356_17585	0.86	-0.4
3,963,397	-		AO356_17585	0.86	-1.2
3,963,397	-		AO356_17585	0.86	+0.1
3,963,397	-		AO356_17585	0.86	+0.1
3,963,478	+				-0.0
3,963,478	+				-0.2
3,963,479	-				+0.8
3,963,479	-				+0.7
3,963,479	-				+0.2
3,963,479	-				-0.2
3,963,531	+		AO356_17590	0.15	-0.4
3,963,531	+		AO356_17590	0.15	-0.4
3,963,531	+		AO356_17590	0.15	-0.8
3,963,531	+		AO356_17590	0.15	-0.2
3,963,532	-		AO356_17590	0.15	-0.3
3,963,532	-		AO356_17590	0.15	+0.2
3,963,623	-		AO356_17590	0.55	+0.4
3,963,655	-		AO356_17590	0.68	+0.4
3,963,655	-		AO356_17590	0.68	+0.5
3,963,655	-		AO356_17590	0.68	-0.8
3,963,655	-		AO356_17590	0.68	+0.0
3,963,753	-				+0.7
3,963,795	+				+0.4
3,963,795	+				+1.0
3,963,795	+				-0.2
3,963,795	+				-0.3
3,963,795	+				+0.5
3,963,796	-				-0.4
3,963,796	-				+0.2
3,963,796	-				-0.8
3,963,892	+				-1.6
3,963,893	-				-0.2
3,964,174	+				+0.3
3,964,174	+				-0.7
3,964,174	+				+0.4
3,964,174	+				+0.2
3,964,174	+				-0.2
3,964,175	-				-0.3
3,964,175	-				+0.3
3,964,175	-				+0.3
3,964,183	+				-0.2
3,964,184	-				+0.3
3,964,184	-				-0.8
3,964,184	-				-0.2
3,964,184	-				-0.5
3,964,184	-				+1.0
3,964,184	-				+0.5
3,964,201	+				+0.3
3,964,201	+				-0.5
3,964,201	+				-1.5
3,964,202	-				+2.7
3,964,202	-				+0.9
3,964,202	-				-0.1
3,964,224	+				-0.7
3,964,224	+				-1.0
3,964,224	+				-0.4
3,964,224	+				+0.5
3,964,224	+				+1.1
3,964,224	+				+0.1
3,964,224	+				+1.0
3,964,225	-				+1.1
3,964,225	-				-0.1
3,964,225	-				+0.7
3,964,225	-				-0.4
3,964,225	-				-0.8
3,964,225	-				+1.1
3,964,225	-				-0.7
3,964,262	+				+0.0
3,964,289	+				-0.2
3,964,289	+				-0.3
3,964,289	+				-2.0
3,964,289	+				+0.2
3,964,290	-				-0.7
3,964,290	-				-0.6
3,964,290	-				+0.7
3,964,290	-				-0.3
3,964,351	+				-0.4
3,964,351	+				-0.2
3,964,352	-				+0.3
3,964,354	+				+0.6
3,964,354	+				-1.2
3,964,354	+				-0.3
3,964,354	+				+0.4
3,964,355	-				-0.1
3,964,355	-				+0.2
3,964,750	+		AO356_17600	0.22	+0.7
3,964,921	+		AO356_17600	0.29	+0.3
3,964,921	+		AO356_17600	0.29	+0.5
3,964,921	+		AO356_17600	0.29	+0.2
3,964,921	+		AO356_17600	0.29	+0.5
3,964,922	-		AO356_17600	0.29	-0.1
3,964,922	-		AO356_17600	0.29	-0.2
3,964,922	-		AO356_17600	0.29	+1.8
3,964,922	-		AO356_17600	0.29	-1.2
3,964,922	-		AO356_17600	0.29	-1.2
3,964,922	-		AO356_17600	0.29	-0.2
3,964,922	-		AO356_17600	0.29	+1.1
3,965,062	+		AO356_17600	0.35	-1.4
3,965,062	+		AO356_17600	0.35	+0.6
3,965,080	+		AO356_17600	0.35	+0.7
3,965,081	-		AO356_17600	0.35	+0.7
3,965,081	-		AO356_17600	0.35	+0.7
3,965,282	-		AO356_17600	0.44	+0.1
3,965,282	-		AO356_17600	0.44	-0.2
3,965,284	+		AO356_17600	0.44	+0.5
3,965,285	-		AO356_17600	0.44	+0.3
3,965,285	-		AO356_17600	0.44	-1.2
3,965,285	-		AO356_17600	0.44	-0.8
3,965,321	+		AO356_17600	0.45	+0.8
3,965,321	+		AO356_17600	0.45	+0.2
3,965,322	-		AO356_17600	0.45	-0.2
3,965,322	-		AO356_17600	0.45	+0.4
3,965,393	+		AO356_17600	0.48	-0.2
3,965,394	-		AO356_17600	0.48	-0.8
3,965,394	-		AO356_17600	0.48	-0.0
3,965,394	-		AO356_17600	0.48	+0.9
3,965,394	-		AO356_17600	0.48	+0.0
3,965,412	-		AO356_17600	0.49	-0.6
3,965,470	+		AO356_17600	0.52	+0.3
3,965,470	+		AO356_17600	0.52	+0.2
3,965,471	-		AO356_17600	0.52	+0.7
3,965,471	-		AO356_17600	0.52	+0.3
3,965,533	+		AO356_17600	0.54	+0.2
3,965,533	+		AO356_17600	0.54	-0.2
3,965,533	+		AO356_17600	0.54	-0.2
3,965,533	+		AO356_17600	0.54	+0.3
3,965,534	-		AO356_17600	0.54	+0.1
3,965,534	-		AO356_17600	0.54	-0.5
3,965,650	+		AO356_17600	0.59	-0.4
3,965,650	+		AO356_17600	0.59	+0.1
3,965,651	-		AO356_17600	0.59	-0.2
3,965,776	+		AO356_17600	0.64	+0.2
3,965,776	+		AO356_17600	0.64	+0.1
3,965,776	+		AO356_17600	0.64	+0.1
3,965,776	+		AO356_17600	0.64	-0.7
3,965,776	+		AO356_17600	0.64	-0.9
3,965,777	-		AO356_17600	0.64	-0.2
3,965,777	-		AO356_17600	0.64	-0.8
3,965,777	-		AO356_17600	0.64	-0.3
3,965,846	+		AO356_17600	0.67	-0.7
3,965,847	-		AO356_17600	0.67	-0.5
3,965,983	+		AO356_17600	0.73	-0.9
3,965,983	+		AO356_17600	0.73	-0.4
3,966,109	+		AO356_17600	0.78	+0.1
3,966,109	+		AO356_17600	0.78	-1.2
3,966,109	+		AO356_17600	0.78	+1.0
3,966,110	-		AO356_17600	0.78	-0.2
3,966,110	-		AO356_17600	0.78	+1.1
3,966,110	-		AO356_17600	0.78	+0.5
3,966,110	-		AO356_17600	0.78	+0.1
3,966,110	-		AO356_17600	0.78	-0.4
3,966,211	+		AO356_17600	0.82	+0.3
3,966,436	-				+0.2
3,966,460	+				+0.2
3,966,460	+				+0.8
3,966,460	+				+0.5
3,966,460	+				+0.4
3,966,460	+				-0.5
3,966,460	+				+0.3
3,966,461	-				+0.3
3,966,461	-				+0.3
3,966,461	-				+0.1
3,966,461	-				+0.3
3,966,532	+				+0.2
3,966,532	+				-0.2
3,966,532	+				+0.2
3,966,532	+				+0.3
3,966,533	-				+0.2
3,966,533	-				+0.5
3,966,533	-				-0.2
3,966,556	+				+0.4
3,966,556	+				-0.2
3,966,556	+				-0.6
3,966,556	+				-1.8
3,966,556	+				-1.2
3,966,556	+				+0.2
3,966,556	+				+0.8
3,966,556	+				+0.7
3,966,557	-				+0.3
3,966,557	-				-0.4
3,966,557	-				-0.2
3,966,557	-				-0.5
3,966,557	-				+0.2
3,966,557	-				+0.5
3,966,610	+				+0.1
3,966,610	+				-0.9
3,966,610	+				-0.2
3,966,610	+				+1.0
3,966,610	+				+0.2
3,966,611	-				-0.4
3,966,611	-				-0.5
3,966,611	-				-0.2
3,966,611	-				+1.1
3,966,611	-				-0.1
3,966,622	+				+0.9
3,966,623	-				+0.2
3,966,748	-				-0.6
3,966,823	-				+0.4
3,966,823	-				-0.2
3,966,850	-				-0.4
3,966,850	-				+0.4
3,966,868	+				-0.2
3,966,868	+				+0.3
3,966,869	-				-0.4
3,966,880	+				-0.8
3,966,881	-				+0.3
3,966,881	-				+0.4
3,966,893	-				-0.2
3,966,908	-				-0.6
3,967,399	+		AO356_17605	0.42	+1.5
3,967,399	+		AO356_17605	0.42	-0.4
3,967,399	+		AO356_17605	0.42	-0.4
3,967,483	+		AO356_17605	0.49	+0.8
3,967,483	+		AO356_17605	0.49	+0.5
3,967,549	+		AO356_17605	0.54	-0.2
3,967,549	+		AO356_17605	0.54	-0.5
3,967,549	+		AO356_17605	0.54	+0.1
3,967,550	-		AO356_17605	0.54	+0.1