Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31500

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,290,821	+		PGA1_c31490	0.30	-1.6
3,290,822	+		PGA1_c31490	0.31	-0.0
3,290,822	+		PGA1_c31490	0.31	-0.1
3,290,822	+		PGA1_c31490	0.31	+0.9
3,290,828	+		PGA1_c31490	0.31	-0.6
3,290,909	+		PGA1_c31490	0.38	+0.1
3,290,953	+		PGA1_c31490	0.42	-0.1
3,291,019	+		PGA1_c31490	0.47	+0.6
3,291,058	-		PGA1_c31490	0.51	+0.8
3,291,064	+		PGA1_c31490	0.51	+0.4
3,291,072	-		PGA1_c31490	0.52	-0.0
3,291,104	-		PGA1_c31490	0.54	+0.3
3,291,112	+		PGA1_c31490	0.55	-0.2
3,291,125	-		PGA1_c31490	0.56	-1.2
3,291,135	+		PGA1_c31490	0.57	-0.6
3,291,135	+		PGA1_c31490	0.57	-0.6
3,291,158	-		PGA1_c31490	0.59	+0.7
3,291,174	+		PGA1_c31490	0.60	+0.7
3,291,181	-		PGA1_c31490	0.61	-1.3
3,291,181	-		PGA1_c31490	0.61	+0.1
3,291,237	-		PGA1_c31490	0.66	-1.3
3,291,250	-		PGA1_c31490	0.67	+0.6
3,291,259	+		PGA1_c31490	0.68	+0.5
3,291,274	+		PGA1_c31490	0.69	-0.7
3,291,274	+		PGA1_c31490	0.69	-0.3
3,291,318	+		PGA1_c31490	0.73	-0.6
3,291,325	+		PGA1_c31490	0.73	-0.0
3,291,356	+		PGA1_c31490	0.76	+0.1
3,291,445	-		PGA1_c31490	0.83	+0.1
3,291,457	+		PGA1_c31490	0.84	-1.2
3,291,484	-		PGA1_c31490	0.87	+1.0
3,291,484	-		PGA1_c31490	0.87	-0.3
3,291,526	+				+0.4
3,291,526	-				-0.6
3,291,556	+				-1.5
3,291,558	+				+0.5
3,291,561	+				-0.9
3,291,561	+				-0.9
3,291,561	+				+1.5
3,291,561	+				-0.3
3,291,561	+				-0.6
3,291,561	+				+0.1
3,291,561	+				+0.3
3,291,561	+				-0.9
3,291,561	+				+0.6
3,291,563	+				+0.6
3,291,564	-				+0.4
3,291,564	-				-0.8
3,291,564	-				+0.7
3,291,569	-				+0.9
3,291,569	-				-0.4
3,291,569	-				+0.1
3,291,569	-				+0.9
3,291,569	-				-0.4
3,291,569	-				-0.5
3,291,574	+				-0.9
3,291,647	+				+0.8
3,291,691	+				+0.8
3,291,709	-				+0.3
3,291,733	-				+0.2
3,291,743	-				+0.6
3,291,755	+				+0.5
3,291,782	+				+0.2
3,291,788	+				+1.1
3,291,789	-				+0.9
3,291,828	+				+0.8
3,291,836	-				-0.2
3,291,836	-				-1.2
3,291,842	+				-0.2
3,291,905	+				-1.0
3,291,914	-				-1.3
3,291,974	+		PGA1_c31500	0.14	-0.2
3,292,012	-		PGA1_c31500	0.17	-1.7
3,292,032	-		PGA1_c31500	0.19	-1.0
3,292,063	-		PGA1_c31500	0.21	+0.6
3,292,065	+		PGA1_c31500	0.22	-0.6
3,292,077	+		PGA1_c31500	0.23	-0.8
3,292,077	+		PGA1_c31500	0.23	-0.6
3,292,077	+		PGA1_c31500	0.23	-0.1
3,292,077	+		PGA1_c31500	0.23	+0.1
3,292,077	+		PGA1_c31500	0.23	-0.0
3,292,085	-		PGA1_c31500	0.23	+1.2
3,292,085	-		PGA1_c31500	0.23	-0.9
3,292,146	+		PGA1_c31500	0.29	-0.0
3,292,146	+		PGA1_c31500	0.29	-0.4
3,292,164	-		PGA1_c31500	0.30	-0.7
3,292,168	+		PGA1_c31500	0.31	-0.6
3,292,183	+		PGA1_c31500	0.32	-0.1
3,292,191	-		PGA1_c31500	0.33	-0.7
3,292,236	+		PGA1_c31500	0.36	+0.6
3,292,252	+		PGA1_c31500	0.38	+1.2
3,292,265	+		PGA1_c31500	0.39	-0.8
3,292,265	+		PGA1_c31500	0.39	-0.8
3,292,273	-		PGA1_c31500	0.40	-0.6
3,292,310	-		PGA1_c31500	0.43	-0.8
3,292,343	-		PGA1_c31500	0.46	-0.8
3,292,349	+		PGA1_c31500	0.46	+0.9
3,292,396	-		PGA1_c31500	0.50	+1.3
3,292,421	-		PGA1_c31500	0.52	-0.8
3,292,496	+		PGA1_c31500	0.59	+0.1
3,292,544	+		PGA1_c31500	0.63	-1.9
3,292,545	+		PGA1_c31500	0.63	-0.9
3,292,545	+		PGA1_c31500	0.63	-0.7
3,292,609	-		PGA1_c31500	0.69	-0.6
3,292,631	+		PGA1_c31500	0.71	+0.2
3,292,632	+		PGA1_c31500	0.71	-0.3
3,292,646	-		PGA1_c31500	0.72	+0.4
3,292,689	+		PGA1_c31500	0.76	-0.7
3,292,699	+		PGA1_c31500	0.77	-0.8
3,292,731	+		PGA1_c31500	0.79	-0.6
3,292,755	+		PGA1_c31500	0.81	-0.7
3,292,854	+				+0.4
3,292,865	-				+0.2
3,292,902	-				+0.9
3,292,917	+				+0.2
3,292,917	+				+1.2
3,292,917	+				-1.3
3,292,925	-				+1.9
3,292,925	-				-1.8
3,292,925	-				-1.0
3,292,925	-				-1.1
3,292,925	-				-0.6
3,292,964	+				-0.3
3,292,970	+				+0.6
3,292,970	+				-0.0
3,292,972	-				+0.5
3,293,010	+				-1.9
3,293,010	+				-0.8
3,293,018	-				+0.6
3,293,032	+				+1.0
3,293,040	-				-2.3
3,293,083	+		PGA1_c31510	0.12	-1.1
3,293,091	-		PGA1_c31510	0.14	+0.6
3,293,100	+		PGA1_c31510	0.15	-0.6
3,293,165	-		PGA1_c31510	0.25	-0.2
3,293,187	-		PGA1_c31510	0.28	+0.7
3,293,241	-		PGA1_c31510	0.37	+0.7
3,293,286	+		PGA1_c31510	0.43	-1.4
3,293,296	+		PGA1_c31510	0.45	-1.0
3,293,296	+		PGA1_c31510	0.45	-0.0
3,293,301	+		PGA1_c31510	0.46	-1.0
3,293,304	-		PGA1_c31510	0.46	+0.5
3,293,304	-		PGA1_c31510	0.46	+0.7
3,293,304	-		PGA1_c31510	0.46	-1.5
3,293,304	-		PGA1_c31510	0.46	+0.3
3,293,306	+		PGA1_c31510	0.47	-0.9
3,293,314	-		PGA1_c31510	0.48	-0.7
3,293,314	-		PGA1_c31510	0.48	-0.9
3,293,341	-		PGA1_c31510	0.52	+0.1
3,293,350	-		PGA1_c31510	0.53	-2.2
3,293,356	+		PGA1_c31510	0.54	-1.1
3,293,393	+		PGA1_c31510	0.60	+1.0
3,293,393	+		PGA1_c31510	0.60	-0.9
3,293,431	-		PGA1_c31510	0.66	-0.4
3,293,452	-		PGA1_c31510	0.69	-1.5
3,293,467	-		PGA1_c31510	0.71	+0.6
3,293,505	-		PGA1_c31510	0.77	-0.3
3,293,546	-		PGA1_c31510	0.83	-1.1
3,293,570	+		PGA1_c31510	0.87	+0.6
3,293,588	+		PGA1_c31510	0.90	+0.7
3,293,588	+		PGA1_c31510	0.90	-0.7
3,293,613	+				+0.0
3,293,620	+				+0.3
3,293,630	+				+1.0
3,293,635	-				+0.9
3,293,638	-				-0.7
3,293,689	-				+0.3
3,293,737	-				+0.9
3,293,748	+				-0.5
3,293,748	+				-1.4
3,293,748	+				-1.9
3,293,748	+				+0.9
3,293,748	+				-1.4
3,293,748	+				+1.4
3,293,748	+				+0.1
3,293,756	-				-0.2
3,293,756	-				+0.4
3,293,756	-				+0.3
3,293,756	-				+1.4
3,293,756	-				-0.6
3,293,756	-				-1.7
3,293,756	-				-0.7
3,293,756	-				+0.5
3,293,756	-				+0.2
3,293,756	-				+0.6
3,293,761	+				-1.0
3,293,761	+				-0.7
3,293,761	+				+0.3
3,293,761	+				-0.1
3,293,761	+				-1.9
3,293,769	-				-0.1
3,293,769	-				+0.6
3,293,769	-				+0.0
3,293,769	-				-0.1
3,293,769	-				-0.0
3,293,769	-				+0.3
3,293,770	-				+1.7
3,293,781	-				+0.2
3,293,782	-				+0.5
3,293,796	+				-0.2
3,293,796	+				+0.2
3,293,796	+				-1.7
3,293,818	+				+0.4
3,293,823	+				+0.4
3,293,831	-				-0.9
3,293,833	-				+0.7
3,293,833	-				+0.3
3,293,837	+				+0.3
3,293,854	-				-0.7
3,293,859	-				+0.2
3,293,906	-		PGA1_c31520	0.13	+0.4
3,293,911	+		PGA1_c31520	0.15	+0.3
3,293,914	-		PGA1_c31520	0.15	+0.6
3,293,914	-		PGA1_c31520	0.15	-1.5
3,293,947	+		PGA1_c31520	0.26	-0.3
3,293,955	-		PGA1_c31520	0.28	+0.9