Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2518

Experiment: BG11 with Fusidic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.25 mg/ml
2,596,823	+		Synpcc7942_2516	0.43	+0.7
2,596,834	+		Synpcc7942_2516	0.48	+0.2
2,596,862	-		Synpcc7942_2516	0.60	-0.4
2,596,869	+		Synpcc7942_2516	0.62	-0.9
2,596,887	-		Synpcc7942_2516	0.70	-1.9
2,596,901	+		Synpcc7942_2516	0.76	-0.9
2,596,982	-				-0.7
2,596,985	+				+1.0
2,596,986	+				+1.0
2,596,993	-				+0.8
2,596,993	-				-0.0
2,596,993	-				-0.5
2,596,993	-				-1.0
2,597,001	+				-0.6
2,597,001	-				+1.8
2,597,008	+				+0.4
2,597,008	+				+0.5
2,597,008	+				-1.1
2,597,013	+				-0.3
2,597,018	+				-0.6
2,597,021	-				-0.8
2,597,077	+				+0.7
2,597,141	-		Synpcc7942_2517	0.16	-0.5
2,597,144	+		Synpcc7942_2517	0.16	-1.0
2,597,183	+		Synpcc7942_2517	0.22	-0.3
2,597,183	+		Synpcc7942_2517	0.22	-1.8
2,597,216	+		Synpcc7942_2517	0.26	-0.6
2,597,272	-		Synpcc7942_2517	0.34	-1.1
2,597,287	+		Synpcc7942_2517	0.37	+1.2
2,597,427	+		Synpcc7942_2517	0.57	-0.0
2,597,454	+				-0.3
2,597,459	+		Synpcc7942_2517	0.61	-1.2
2,597,467	-		Synpcc7942_2517	0.62	-0.1
2,597,478	+		Synpcc7942_2517	0.64	-1.1
2,597,535	+		Synpcc7942_2517	0.72	+0.3
2,597,535	+		Synpcc7942_2517	0.72	-0.3
2,597,535	+		Synpcc7942_2517	0.72	-1.3
2,597,543	-		Synpcc7942_2517	0.73	-0.4
2,597,543	-		Synpcc7942_2517	0.73	-0.6
2,597,554	+		Synpcc7942_2517	0.75	-2.1
2,597,558	-		Synpcc7942_2517	0.75	-0.4
2,597,599	-		Synpcc7942_2517	0.81	-1.3
2,597,724	+				-0.4
2,597,732	-				-1.1
2,597,732	-				+1.7
2,597,748	+				-1.2
2,597,762	+				-1.5
2,597,778	-				-0.0
2,597,783	-				+0.9
2,597,794	+				-0.8
2,597,794	+				+0.3
2,597,794	+				+0.0
2,597,794	+				-0.6
2,597,794	+				-0.1
2,597,794	+				+0.3
2,597,795	-				+0.4
2,597,802	-				-0.8
2,597,811	+				-0.8
2,597,916	+	glgA	Synpcc7942_2518	0.12	+2.0
2,598,471	+	glgA	Synpcc7942_2518	0.52	-2.2
2,598,589	+	glgA	Synpcc7942_2518	0.60	-1.5
2,598,707	-	glgA	Synpcc7942_2518	0.68	-0.6
2,599,107	+				-1.3
2,599,135	+				-1.6
2,599,152	+				-0.7
2,599,154	+				+0.0
2,599,154	+				-1.3
2,599,162	-				-2.0
2,599,173	+				-1.4
2,599,176	+				+0.2
2,599,176	+				-1.9
2,599,176	-				-1.0
2,599,181	-				+0.4
2,599,182	+				+0.5
2,599,184	-				+0.2
2,599,184	-				-0.5
2,599,196	-				+0.0
2,599,211	+				+0.3
2,599,223	+				+0.6
2,599,241	-				-0.9
2,599,246	+				+0.3
2,599,249	+				-0.3
2,599,254	-				+0.3
2,599,266	+				-0.5
2,599,266	+				+0.1
2,599,267	+				-0.2
2,599,267	+				+0.4
2,599,274	-				-1.2
2,599,306	+				-0.1
2,599,306	+				+0.4
2,599,309	-				-0.8
2,599,314	-				-1.0
2,599,314	-				+0.8
2,599,355	-				-1.2
2,599,368	-				-0.1
2,599,493	-		Synpcc7942_2519	0.11	-1.5
2,599,494	-		Synpcc7942_2519	0.11	-1.9
2,599,495	+				+2.0
2,599,503	-		Synpcc7942_2519	0.12	-0.2
2,599,517	+		Synpcc7942_2519	0.12	+0.8
2,599,525	-		Synpcc7942_2519	0.12	-0.3
2,599,525	-		Synpcc7942_2519	0.12	+0.5
2,599,582	+		Synpcc7942_2519	0.14	-1.0
2,599,582	+		Synpcc7942_2519	0.14	-0.2
2,599,585	-		Synpcc7942_2519	0.15	-0.5
2,599,651	+		Synpcc7942_2519	0.17	-0.7
2,600,022	+		Synpcc7942_2519	0.31	-1.0
2,600,038	-		Synpcc7942_2519	0.31	-0.8
2,600,091	+		Synpcc7942_2519	0.33	+0.2
2,600,099	-		Synpcc7942_2519	0.34	+0.7
2,600,101	-		Synpcc7942_2519	0.34	+0.1
2,600,114	-		Synpcc7942_2519	0.34	+0.3
2,600,120	-		Synpcc7942_2519	0.34	+0.4
2,600,126	-		Synpcc7942_2519	0.35	-0.5