Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2045

Experiment: BG11 with Fusidic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.25 mg/ml
2,114,149	+				+1.1
2,114,149	+				+0.1
2,114,175	+				+0.5
2,114,195	-				-0.0
2,114,242	+				-2.8
2,114,250	-				-1.4
2,114,250	-				-0.6
2,114,260	-				+0.6
2,114,300	-				-1.4
2,114,318	+				+0.5
2,114,412	+				-0.3
2,114,435	+				-1.2
2,114,443	-				+1.5
2,114,454	+				-1.9
2,114,462	-				+0.2
2,114,502	+	smc	Synpcc7942_2045	0.10	-0.8
2,114,576	-	smc	Synpcc7942_2045	0.12	-1.3
2,114,577	-	smc	Synpcc7942_2045	0.12	-0.9
2,114,584	+	smc	Synpcc7942_2045	0.13	-0.4
2,114,642	+	smc	Synpcc7942_2045	0.14	-2.6
2,114,667	-	smc	Synpcc7942_2045	0.15	-0.6
2,114,726	+	smc	Synpcc7942_2045	0.16	-0.8
2,114,766	+	smc	Synpcc7942_2045	0.18	-1.2
2,114,766	-	smc	Synpcc7942_2045	0.18	-1.1
2,114,768	+	smc	Synpcc7942_2045	0.18	-2.3
2,114,832	+	smc	Synpcc7942_2045	0.19	-2.2
2,115,001	+	smc	Synpcc7942_2045	0.24	-1.4
2,115,002	+	smc	Synpcc7942_2045	0.24	-0.9
2,115,067	-	smc	Synpcc7942_2045	0.26	-0.5
2,115,129	-	smc	Synpcc7942_2045	0.28	-1.1
2,115,139	-	smc	Synpcc7942_2045	0.28	-0.0
2,115,154	+	smc	Synpcc7942_2045	0.28	-2.2
2,115,156	+	smc	Synpcc7942_2045	0.28	+0.3
2,115,191	-	smc	Synpcc7942_2045	0.29	-1.2
2,115,209	-	smc	Synpcc7942_2045	0.30	-1.2
2,115,220	+	smc	Synpcc7942_2045	0.30	-0.1
2,115,301	+	smc	Synpcc7942_2045	0.33	-1.8
2,115,310	-	smc	Synpcc7942_2045	0.33	-2.0
2,115,322	-	smc	Synpcc7942_2045	0.33	-2.2
2,115,366	-	smc	Synpcc7942_2045	0.34	-0.9
2,115,398	-	smc	Synpcc7942_2045	0.35	-0.8
2,115,400	+	smc	Synpcc7942_2045	0.35	-1.0
2,115,405	+	smc	Synpcc7942_2045	0.35	-1.3
2,115,408	-	smc	Synpcc7942_2045	0.36	-2.2
2,115,410	+	smc	Synpcc7942_2045	0.36	+0.2
2,115,410	+	smc	Synpcc7942_2045	0.36	-1.4
2,115,418	-	smc	Synpcc7942_2045	0.36	-1.1
2,115,447	+	smc	Synpcc7942_2045	0.37	-1.3
2,115,470	-	smc	Synpcc7942_2045	0.37	-1.2
2,115,484	+	smc	Synpcc7942_2045	0.38	+0.1
2,115,489	+	smc	Synpcc7942_2045	0.38	-0.8
2,115,497	-	smc	Synpcc7942_2045	0.38	-1.4
2,115,616	-	smc	Synpcc7942_2045	0.41	-1.8
2,115,642	-	smc	Synpcc7942_2045	0.42	-1.9
2,115,652	+	smc	Synpcc7942_2045	0.42	-0.4
2,115,701	+	smc	Synpcc7942_2045	0.44	-1.3
2,115,725	+	smc	Synpcc7942_2045	0.44	-0.5
2,115,736	+	smc	Synpcc7942_2045	0.45	-1.0
2,115,736	+	smc	Synpcc7942_2045	0.45	+0.4
2,115,736	+	smc	Synpcc7942_2045	0.45	+1.1
2,115,744	-	smc	Synpcc7942_2045	0.45	-1.9
2,115,744	-	smc	Synpcc7942_2045	0.45	-1.5
2,115,744	-	smc	Synpcc7942_2045	0.45	-0.7
2,115,744	-	smc	Synpcc7942_2045	0.45	-1.8
2,115,744	-	smc	Synpcc7942_2045	0.45	-0.4
2,115,757	+	smc	Synpcc7942_2045	0.45	-0.5
2,115,762	+	smc	Synpcc7942_2045	0.45	-1.8
2,115,842	-	smc	Synpcc7942_2045	0.48	-3.3
2,115,842	-	smc	Synpcc7942_2045	0.48	-0.2
2,115,863	+				+1.5
2,115,930	-	smc	Synpcc7942_2045	0.50	-1.6
2,115,971	-	smc	Synpcc7942_2045	0.51	-2.5
2,115,971	-	smc	Synpcc7942_2045	0.51	-1.6
2,116,044	+	smc	Synpcc7942_2045	0.53	-0.9
2,116,077	+	smc	Synpcc7942_2045	0.54	-0.5
2,116,084	+	smc	Synpcc7942_2045	0.54	-1.1
2,116,085	-	smc	Synpcc7942_2045	0.54	-0.9
2,116,091	+	smc	Synpcc7942_2045	0.55	-2.1
2,116,092	-	smc	Synpcc7942_2045	0.55	+1.1
2,116,101	+	smc	Synpcc7942_2045	0.55	-0.3
2,116,101	+	smc	Synpcc7942_2045	0.55	+1.6
2,116,135	+	smc	Synpcc7942_2045	0.56	-2.6
2,116,135	+	smc	Synpcc7942_2045	0.56	-1.3
2,116,143	-	smc	Synpcc7942_2045	0.56	-0.3
2,116,167	-	smc	Synpcc7942_2045	0.57	-1.9
2,116,176	-	smc	Synpcc7942_2045	0.57	-1.0
2,116,205	+	smc	Synpcc7942_2045	0.58	-1.5
2,116,213	-				+0.5
2,116,247	+	smc	Synpcc7942_2045	0.59	-3.0
2,116,265	+	smc	Synpcc7942_2045	0.59	-0.8
2,116,285	-	smc	Synpcc7942_2045	0.60	+1.2
2,116,285	-	smc	Synpcc7942_2045	0.60	-0.5
2,116,303	+	smc	Synpcc7942_2045	0.60	-1.8
2,116,322	+	smc	Synpcc7942_2045	0.61	+0.5
2,116,322	+	smc	Synpcc7942_2045	0.61	-1.6
2,116,330	-	smc	Synpcc7942_2045	0.61	-0.5
2,116,341	+	smc	Synpcc7942_2045	0.62	-0.6
2,116,355	+	smc	Synpcc7942_2045	0.62	-0.1
2,116,370	-	smc	Synpcc7942_2045	0.62	-3.1
2,116,370	-	smc	Synpcc7942_2045	0.62	-2.4
2,116,427	-	smc	Synpcc7942_2045	0.64	-0.9
2,116,427	-	smc	Synpcc7942_2045	0.64	-0.8
2,116,427	-	smc	Synpcc7942_2045	0.64	-1.3
2,116,429	+	smc	Synpcc7942_2045	0.64	-3.5
2,116,429	+	smc	Synpcc7942_2045	0.64	-2.8
2,116,434	+	smc	Synpcc7942_2045	0.64	-0.4
2,116,434	+	smc	Synpcc7942_2045	0.64	+0.1
2,116,434	+	smc	Synpcc7942_2045	0.64	+0.1
2,116,434	+	smc	Synpcc7942_2045	0.64	-2.0
2,116,437	-	smc	Synpcc7942_2045	0.64	-1.1
2,116,437	-	smc	Synpcc7942_2045	0.64	+0.5
2,116,442	-	smc	Synpcc7942_2045	0.64	-1.7
2,116,442	-	smc	Synpcc7942_2045	0.64	-1.1
2,116,442	-	smc	Synpcc7942_2045	0.64	-0.7
2,116,478	-	smc	Synpcc7942_2045	0.65	-0.8
2,116,500	-	smc	Synpcc7942_2045	0.66	-1.6
2,116,543	+	smc	Synpcc7942_2045	0.67	-1.9
2,116,571	-	smc	Synpcc7942_2045	0.68	-1.6
2,116,624	+	smc	Synpcc7942_2045	0.69	-2.9
2,116,632	-	smc	Synpcc7942_2045	0.70	-1.3
2,116,638	+	smc	Synpcc7942_2045	0.70	-1.9
2,116,690	-	smc	Synpcc7942_2045	0.71	-0.1
2,116,690	-	smc	Synpcc7942_2045	0.71	-1.3
2,116,716	+	smc	Synpcc7942_2045	0.72	-1.9
2,116,750	-	smc	Synpcc7942_2045	0.73	-1.5
2,116,752	+	smc	Synpcc7942_2045	0.73	+5.0
2,116,752	+	smc	Synpcc7942_2045	0.73	-1.7
2,116,760	-	smc	Synpcc7942_2045	0.73	-1.6
2,116,760	-	smc	Synpcc7942_2045	0.73	+0.8
2,116,761	+	smc	Synpcc7942_2045	0.73	-1.4
2,116,781	-	smc	Synpcc7942_2045	0.74	-0.9
2,116,794	+	smc	Synpcc7942_2045	0.74	-0.3
2,116,819	-	smc	Synpcc7942_2045	0.75	-0.8
2,116,819	-	smc	Synpcc7942_2045	0.75	-0.5
2,116,843	+	smc	Synpcc7942_2045	0.76	-0.3
2,116,843	+				+0.5
2,116,887	+	smc	Synpcc7942_2045	0.77	-2.4
2,116,887	+	smc	Synpcc7942_2045	0.77	-1.8
2,116,904	+	smc	Synpcc7942_2045	0.77	+0.6
2,116,936	+	smc	Synpcc7942_2045	0.78	-1.0
2,116,936	+	smc	Synpcc7942_2045	0.78	-1.9
2,116,944	-	smc	Synpcc7942_2045	0.78	-2.6
2,116,977	+	smc	Synpcc7942_2045	0.79	-0.8
2,116,977	+	smc	Synpcc7942_2045	0.79	-2.0
2,116,985	-	smc	Synpcc7942_2045	0.79	-1.8
2,117,004	-	smc	Synpcc7942_2045	0.80	-0.7
2,117,023	+	smc	Synpcc7942_2045	0.81	+0.5
2,117,049	-	smc	Synpcc7942_2045	0.81	-1.8
2,117,049	-	smc	Synpcc7942_2045	0.81	-2.0
2,117,049	-	smc	Synpcc7942_2045	0.81	-1.1
2,117,077	+	smc	Synpcc7942_2045	0.82	-2.3
2,117,117	+	smc	Synpcc7942_2045	0.83	+0.3
2,117,118	+	smc	Synpcc7942_2045	0.83	+0.5
2,117,118	+	smc	Synpcc7942_2045	0.83	-2.3
2,117,123	+	smc	Synpcc7942_2045	0.83	-2.9
2,117,129	+	smc	Synpcc7942_2045	0.83	+0.1
2,117,129	+	smc	Synpcc7942_2045	0.83	-2.5
2,117,129	+	smc	Synpcc7942_2045	0.83	-0.4
2,117,129	+	smc	Synpcc7942_2045	0.83	-0.4
2,117,137	-	smc	Synpcc7942_2045	0.84	-0.9
2,117,139	+	smc	Synpcc7942_2045	0.84	+1.2
2,117,168	+	smc	Synpcc7942_2045	0.85	-0.8
2,117,173	-	smc	Synpcc7942_2045	0.85	-0.9
2,117,173	-	smc	Synpcc7942_2045	0.85	-1.1
2,117,217	-	smc	Synpcc7942_2045	0.86	-0.9
2,117,224	+	smc	Synpcc7942_2045	0.86	-1.9
2,117,248	+	smc	Synpcc7942_2045	0.87	+0.4
2,117,255	-	smc	Synpcc7942_2045	0.87	-0.8
2,117,275	-	smc	Synpcc7942_2045	0.88	-1.2
2,117,306	+	smc	Synpcc7942_2045	0.88	-0.1
2,117,306	+	smc	Synpcc7942_2045	0.88	-1.1
2,117,314	-	smc	Synpcc7942_2045	0.89	-2.4
2,117,314	-	smc	Synpcc7942_2045	0.89	-1.5
2,117,333	-	smc	Synpcc7942_2045	0.89	-0.9
2,117,341	-	smc	Synpcc7942_2045	0.89	-1.9
2,117,400	+				-1.3
2,117,424	+				-1.2
2,117,432	-				-0.9
2,117,448	+				-3.1
2,117,466	+				-1.3
2,117,468	-				+0.5
2,117,468	-				-1.1
2,117,471	+				+0.1
2,117,501	-				-1.3
2,117,532	-				-1.2
2,117,564	+				-1.6
2,117,571	+				-1.6
2,117,571	+				-2.5
2,117,571	+				-1.1
2,117,579	-				-0.9
2,117,585	-				-0.9
2,117,592	+				-1.3
2,117,592	+				-1.3
2,117,618	-				-1.8
2,117,637	-				-2.4
2,117,706	+				+0.2
2,117,706	+				-1.4
2,117,714	-				-2.9
2,117,732	+				-0.7
2,117,734	+				-0.3
2,117,739	-				+0.9
2,117,741	+				-0.1
2,117,741	+				+0.8
2,117,749	-				-2.3
2,117,749	-				-1.4
2,117,756	-				-0.4
2,117,756	-				+0.8
2,117,799	+				-0.3
2,117,799	+				-0.3
2,117,801	+				-0.7
2,117,801	+				-0.6
2,117,806	+				+0.2
2,117,806	+				+0.6
2,117,806	+				-0.5
2,117,806	+				-0.6
2,117,807	-				-0.5
2,117,809	-				-0.4
2,117,814	-				-0.6
2,117,814	-				+0.1
2,117,819	+				+0.5
2,117,824	+				-0.3
2,117,824	+				+0.1
2,117,898	+				-1.4
2,117,914	+				-0.3
2,117,988	-				-1.3
2,118,042	-				-1.8
2,118,055	-				-0.1
2,118,065	+				-1.4
2,118,070	+				-1.5
2,118,078	-				+1.1
2,118,093	+				+2.1
2,118,102	+	gcsH	Synpcc7942_2046	0.10	-0.3
2,118,110	-	gcsH	Synpcc7942_2046	0.12	+1.5
2,118,145	+	gcsH	Synpcc7942_2046	0.21	+1.1
2,118,240	+	gcsH	Synpcc7942_2046	0.46	+0.1
2,118,240	-	gcsH	Synpcc7942_2046	0.46	-0.4
2,118,248	-	gcsH	Synpcc7942_2046	0.48	+1.1
2,118,266	-	gcsH	Synpcc7942_2046	0.52	-0.0
2,118,269	-	gcsH	Synpcc7942_2046	0.53	+0.7
2,118,269	-	gcsH	Synpcc7942_2046	0.53	+0.1
2,118,353	+	gcsH	Synpcc7942_2046	0.75	+0.1
2,118,361	-	gcsH	Synpcc7942_2046	0.77	+0.1
2,118,367	+	gcsH	Synpcc7942_2046	0.78	-1.8
2,118,374	+	gcsH	Synpcc7942_2046	0.80	-2.8
2,118,379	+	gcsH	Synpcc7942_2046	0.81	-2.1
2,118,382	-	gcsH	Synpcc7942_2046	0.82	-1.4
2,118,387	-	gcsH	Synpcc7942_2046	0.83	-0.5
2,118,408	+	gcsH	Synpcc7942_2046	0.89	+0.5
2,118,414	-				+1.1
2,118,424	+				+0.1
2,118,424	+				-0.8
2,118,427	-				+1.6
2,118,427	-				+2.1
2,118,427	-				+0.1
2,118,442	+				-0.4
2,118,460	-				-1.6
2,118,480	+				+1.3
2,118,480	-				+0.2
2,118,486	+				-0.2
2,118,486	+				-0.1
2,118,506	+				-0.5
2,118,529	+				-0.1
2,118,530	-				-0.8
2,118,530	-				-0.9
2,118,558	-				+0.5
2,118,601	+				-0.3
2,118,629	-				+0.6
2,118,664	+				+1.1
2,118,671	+				-0.9
2,118,671	+				+0.7
2,118,679	-				-0.3
2,118,679	-				+1.1