Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1605

Experiment: BG11 with Fusidic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.25 mg/ml
1,669,643	-	cdpA	Synpcc7942_1604	0.27	-1.9
1,669,696	-	cdpA	Synpcc7942_1604	0.31	-1.5
1,669,811	+	cdpA	Synpcc7942_1604	0.40	+0.0
1,669,814	-	cdpA	Synpcc7942_1604	0.40	-2.5
1,669,819	-	cdpA	Synpcc7942_1604	0.40	-1.3
1,669,868	-	cdpA	Synpcc7942_1604	0.44	-1.8
1,669,913	+	cdpA	Synpcc7942_1604	0.47	-3.2
1,670,077	-	cdpA	Synpcc7942_1604	0.59	-1.8
1,670,144	+	cdpA	Synpcc7942_1604	0.64	-0.5
1,670,147	+	cdpA	Synpcc7942_1604	0.65	-3.1
1,670,156	-	cdpA	Synpcc7942_1604	0.65	-0.3
1,670,181	-	cdpA	Synpcc7942_1604	0.67	-1.0
1,670,200	-	cdpA	Synpcc7942_1604	0.69	-1.7
1,670,208	+	cdpA	Synpcc7942_1604	0.69	-1.9
1,670,217	+	cdpA	Synpcc7942_1604	0.70	-0.3
1,670,225	-	cdpA	Synpcc7942_1604	0.70	-3.6
1,670,373	+	cdpA	Synpcc7942_1604	0.81	-2.8
1,670,417	-	cdpA	Synpcc7942_1604	0.85	-3.1
1,670,488	-	cdpA	Synpcc7942_1604	0.90	-2.2
1,670,518	+				-4.3
1,670,526	-				-0.8
1,670,526	-				+0.5
1,670,593	+				-0.8
1,670,598	+				-0.4
1,670,627	-				-0.6
1,670,678	-				+2.9
1,670,724	-		Synpcc7942_1605	0.16	+2.9
1,670,755	+		Synpcc7942_1605	0.22	+2.8
1,670,775	+		Synpcc7942_1605	0.25	+2.4
1,670,775	-		Synpcc7942_1605	0.25	+4.0
1,670,853	-		Synpcc7942_1605	0.39	+1.0
1,670,853	-		Synpcc7942_1605	0.39	+2.2
1,670,867	+		Synpcc7942_1605	0.41	+1.4
1,670,869	+		Synpcc7942_1605	0.41	+1.7
1,670,874	+		Synpcc7942_1605	0.42	+2.9
1,670,875	-		Synpcc7942_1605	0.42	-1.0
1,670,890	-		Synpcc7942_1605	0.45	+2.3
1,670,896	+		Synpcc7942_1605	0.46	+2.7
1,670,896	+		Synpcc7942_1605	0.46	+2.8
1,670,896	+		Synpcc7942_1605	0.46	+2.2
1,670,899	-		Synpcc7942_1605	0.46	+1.8
1,670,904	-		Synpcc7942_1605	0.47	+3.1
1,670,904	-		Synpcc7942_1605	0.47	+2.5
1,670,916	-		Synpcc7942_1605	0.49	+2.7
1,670,941	-		Synpcc7942_1605	0.54	+2.7
1,670,941	-		Synpcc7942_1605	0.54	+3.4
1,670,951	-		Synpcc7942_1605	0.55	+2.3
1,670,951	-		Synpcc7942_1605	0.55	+2.8
1,670,982	+		Synpcc7942_1605	0.61	+2.6
1,671,012	+		Synpcc7942_1605	0.66	+1.0
1,671,020	-		Synpcc7942_1605	0.67	+2.6
1,671,089	-		Synpcc7942_1605	0.79	+2.4
1,671,127	+		Synpcc7942_1605	0.86	+3.1
1,671,192	-				+1.9
1,671,414	+				-2.1
1,671,420	-				-1.0
1,671,433	-				-1.0
1,671,884	+		Synpcc7942_1606	0.77	+1.6
1,671,885	-		Synpcc7942_1606	0.77	+1.3
1,671,892	-		Synpcc7942_1606	0.79	+1.1
1,672,003	+				+1.6
1,672,173	+				+0.8