Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1335

Experiment: BG11 with Fusidic 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.25 mg/ml
1,365,489	+	trpE	Synpcc7942_1334	0.51	+1.1
1,365,881	+	trpE	Synpcc7942_1334	0.79	+0.1
1,366,028	-	trpE	Synpcc7942_1334	0.89	+0.1
1,366,097	+				+0.1
1,366,159	-				-0.3
1,366,164	+				+0.1
1,366,334	+		Synpcc7942_1335	0.20	-2.1
1,366,399	+		Synpcc7942_1335	0.28	-1.8
1,366,446	-		Synpcc7942_1335	0.34	-1.8
1,366,446	-		Synpcc7942_1335	0.34	-2.4
1,366,446	-		Synpcc7942_1335	0.34	-1.0
1,366,446	-		Synpcc7942_1335	0.34	-0.6
1,366,466	+		Synpcc7942_1335	0.36	-1.6
1,366,613	+		Synpcc7942_1335	0.55	+1.1
1,366,613	+		Synpcc7942_1335	0.55	+0.7
1,366,640	+		Synpcc7942_1335	0.58	+0.1
1,366,671	+		Synpcc7942_1335	0.62	-1.3
1,366,753	+		Synpcc7942_1335	0.72	+0.5
1,366,766	-		Synpcc7942_1335	0.74	-1.9
1,366,773	+		Synpcc7942_1335	0.75	-0.0
1,366,917	+				+2.1
1,366,917	+				-0.9
1,366,935	-				-0.3
1,366,968	-				-1.0
1,367,019	+				-0.1
1,367,020	+				-0.8
1,367,027	-				+0.5
1,367,068	+				-0.2
1,367,086	-				+0.3
1,367,122	-				-0.1
1,367,207	+				+0.2
1,367,215	-				-1.7
1,367,225	-				+0.3
1,367,225	-				-0.5
1,367,226	+				+0.6
1,367,253	+				-0.6
1,367,296	-				-0.1
1,367,306	-				-1.5
1,367,306	-				+0.7
1,367,323	+				-0.3
1,367,354	+				-2.0
1,367,362	+				-0.5
1,367,439	+		Synpcc7942_1336	0.16	-0.2
1,367,458	+		Synpcc7942_1336	0.18	-0.7
1,367,493	-		Synpcc7942_1336	0.21	-2.2
1,367,504	+		Synpcc7942_1336	0.22	-0.7
1,367,522	+		Synpcc7942_1336	0.24	+0.5
1,367,529	+		Synpcc7942_1336	0.25	-1.0
1,367,529	+		Synpcc7942_1336	0.25	-1.2
1,367,529	+		Synpcc7942_1336	0.25	+0.1
1,367,529	+		Synpcc7942_1336	0.25	-0.9
1,367,529	+		Synpcc7942_1336	0.25	-0.7
1,367,537	-		Synpcc7942_1336	0.25	-0.8
1,367,537	-		Synpcc7942_1336	0.25	-0.9
1,367,537	-		Synpcc7942_1336	0.25	+1.5
1,367,537	-		Synpcc7942_1336	0.25	+0.4
1,367,537	-		Synpcc7942_1336	0.25	-0.5
1,367,537	-		Synpcc7942_1336	0.25	+0.5
1,367,563	+		Synpcc7942_1336	0.28	+0.3
1,367,566	-		Synpcc7942_1336	0.28	+0.5
1,367,595	+		Synpcc7942_1336	0.31	-1.6
1,367,602	-		Synpcc7942_1336	0.31	-1.7
1,367,602	-		Synpcc7942_1336	0.31	+0.0
1,367,603	-		Synpcc7942_1336	0.32	+0.1
1,367,643	+		Synpcc7942_1336	0.35	-0.2
1,367,643	+		Synpcc7942_1336	0.35	-0.2
1,367,643	+		Synpcc7942_1336	0.35	+0.3
1,367,651	-		Synpcc7942_1336	0.36	-0.9
1,367,651	-		Synpcc7942_1336	0.36	+0.7
1,367,651	-		Synpcc7942_1336	0.36	-0.3
1,367,651	-		Synpcc7942_1336	0.36	-0.9
1,367,651	-		Synpcc7942_1336	0.36	-0.6
1,367,651	-		Synpcc7942_1336	0.36	-1.1
1,367,653	+		Synpcc7942_1336	0.36	-0.4
1,367,674	+		Synpcc7942_1336	0.38	-0.0
1,367,674	+		Synpcc7942_1336	0.38	-1.8
1,367,680	-		Synpcc7942_1336	0.39	-0.6
1,367,682	-		Synpcc7942_1336	0.39	-1.0
1,367,687	+		Synpcc7942_1336	0.39	-2.8
1,367,696	+		Synpcc7942_1336	0.40	-0.2
1,367,709	+		Synpcc7942_1336	0.41	-0.4
1,367,717	-		Synpcc7942_1336	0.42	-0.5
1,367,768	+		Synpcc7942_1336	0.47	-0.5
1,367,864	+		Synpcc7942_1336	0.56	+0.8
1,367,869	+		Synpcc7942_1336	0.56	-1.8
1,367,869	+		Synpcc7942_1336	0.56	-0.4
1,367,877	-		Synpcc7942_1336	0.57	-0.2
1,367,917	+		Synpcc7942_1336	0.61	-1.5
1,367,940	+		Synpcc7942_1336	0.63	+0.9