Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28665

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,376,896	+		PFLU_RS28655	0.36	-4.0
6,376,896	+		PFLU_RS28655	0.36	-2.0
6,376,896	+		PFLU_RS28655	0.36	-1.5
6,376,896	+		PFLU_RS28655	0.36	-3.1
6,376,896	+		PFLU_RS28655	0.36	-1.1
6,376,896	+		PFLU_RS28655	0.36	-2.5
6,376,896	+		PFLU_RS28655	0.36	-3.7
6,376,896	+		PFLU_RS28655	0.36	-2.0
6,376,896	+		PFLU_RS28655	0.36	-2.6
6,376,896	+		PFLU_RS28655	0.36	-3.5
6,376,896	+		PFLU_RS28655	0.36	-3.2
6,376,896	+		PFLU_RS28655	0.36	-2.1
6,376,896	+		PFLU_RS28655	0.36	-1.2
6,376,897	-		PFLU_RS28655	0.36	-1.1
6,376,897	-		PFLU_RS28655	0.36	-2.2
6,376,897	-		PFLU_RS28655	0.36	-2.2
6,376,897	-		PFLU_RS28655	0.36	-0.4
6,376,897	-		PFLU_RS28655	0.36	-2.4
6,376,897	-		PFLU_RS28655	0.36	-1.9
6,376,897	-		PFLU_RS28655	0.36	-3.3
6,376,897	-		PFLU_RS28655	0.36	-1.8
6,376,897	-		PFLU_RS28655	0.36	-1.0
6,376,897	-		PFLU_RS28655	0.36	-2.6
6,376,897	-		PFLU_RS28655	0.36	-2.7
6,376,897	-		PFLU_RS28655	0.36	-3.1
6,376,897	-		PFLU_RS28655	0.36	-2.4
6,376,897	-		PFLU_RS28655	0.36	-1.7
6,376,897	-		PFLU_RS28655	0.36	-3.2
6,376,897	-		PFLU_RS28655	0.36	-2.8
6,376,897	-		PFLU_RS28655	0.36	-0.6
6,376,898	+		PFLU_RS28655	0.36	-1.6
6,376,898	+		PFLU_RS28655	0.36	-1.9
6,376,898	+		PFLU_RS28655	0.36	-1.0
6,376,898	+		PFLU_RS28655	0.36	-0.4
6,376,898	+		PFLU_RS28655	0.36	-2.2
6,376,898	+		PFLU_RS28655	0.36	-2.2
6,376,898	+		PFLU_RS28655	0.36	-3.4
6,376,898	+		PFLU_RS28655	0.36	-4.0
6,376,898	+		PFLU_RS28655	0.36	-0.8
6,376,898	+		PFLU_RS28655	0.36	-2.9
6,376,898	+		PFLU_RS28655	0.36	-4.1
6,376,898	+		PFLU_RS28655	0.36	-0.2
6,376,898	+		PFLU_RS28655	0.36	-0.8
6,376,898	+		PFLU_RS28655	0.36	-2.7
6,376,899	-		PFLU_RS28655	0.37	-0.7
6,376,899	-		PFLU_RS28655	0.37	-1.5
6,376,899	-		PFLU_RS28655	0.37	-1.4
6,376,899	-		PFLU_RS28655	0.37	-3.1
6,376,899	-		PFLU_RS28655	0.37	-2.2
6,376,899	-		PFLU_RS28655	0.37	-2.4
6,377,082	+		PFLU_RS28655	0.64	-2.2
6,377,083	-		PFLU_RS28655	0.65	-1.3
6,377,104	+		PFLU_RS28655	0.68	-2.4
6,377,104	+		PFLU_RS28655	0.68	-2.0
6,377,104	+		PFLU_RS28655	0.68	-3.1
6,377,104	+		PFLU_RS28655	0.68	-3.5
6,377,105	-		PFLU_RS28655	0.68	-1.8
6,377,105	-		PFLU_RS28655	0.68	-4.3
6,377,105	-		PFLU_RS28655	0.68	-0.4
6,377,163	+		PFLU_RS28655	0.77	-0.7
6,377,181	+		PFLU_RS28655	0.79	-3.1
6,377,181	+		PFLU_RS28655	0.79	-3.3
6,377,181	+		PFLU_RS28655	0.79	-1.1
6,377,181	+		PFLU_RS28655	0.79	-2.8
6,377,181	+		PFLU_RS28655	0.79	-2.7
6,377,181	+		PFLU_RS28655	0.79	-2.9
6,377,181	+		PFLU_RS28655	0.79	-2.1
6,377,181	+		PFLU_RS28655	0.79	-1.1
6,377,181	+		PFLU_RS28655	0.79	-2.1
6,377,182	-		PFLU_RS28655	0.80	+0.5
6,377,182	-		PFLU_RS28655	0.80	-2.6
6,377,187	+		PFLU_RS28655	0.80	-2.1
6,377,187	+		PFLU_RS28655	0.80	-4.0
6,377,300	+				+1.5
6,377,300	+				-1.2
6,377,300	+				-1.6
6,377,300	+				-0.8
6,377,300	+				-3.5
6,377,300	+				-0.6
6,377,300	+				-2.5
6,377,300	+				-1.9
6,377,300	+				-0.4
6,377,301	-				-3.9
6,377,301	-				-3.0
6,377,301	-				-2.4
6,377,301	-				-2.5
6,377,301	-				-2.9
6,377,301	-				-1.4
6,377,301	-				-1.5
6,377,301	-				-0.7
6,377,411	+				+0.0
6,377,411	+				-0.3
6,377,505	-		PFLU_RS28660	0.21	-0.9
6,377,531	+		PFLU_RS28660	0.27	-0.2
6,377,532	-		PFLU_RS28660	0.28	+0.1
6,377,573	+		PFLU_RS28660	0.37	+0.2
6,377,573	+		PFLU_RS28660	0.37	-1.6
6,377,574	-		PFLU_RS28660	0.38	-1.4
6,377,574	-		PFLU_RS28660	0.38	+0.7
6,377,574	-		PFLU_RS28660	0.38	-1.1
6,377,575	+		PFLU_RS28660	0.38	+0.9
6,377,575	+		PFLU_RS28660	0.38	+0.8
6,377,575	+		PFLU_RS28660	0.38	-0.2
6,377,575	+		PFLU_RS28660	0.38	-1.2
6,377,575	+		PFLU_RS28660	0.38	+2.9
6,377,575	+		PFLU_RS28660	0.38	-0.4
6,377,575	+		PFLU_RS28660	0.38	-1.9
6,377,575	+		PFLU_RS28660	0.38	-2.6
6,377,575	+		PFLU_RS28660	0.38	-1.9
6,377,575	+		PFLU_RS28660	0.38	-0.9
6,377,575	+		PFLU_RS28660	0.38	-1.6
6,377,575	+		PFLU_RS28660	0.38	+1.3
6,377,575	+		PFLU_RS28660	0.38	+0.8
6,377,575	+		PFLU_RS28660	0.38	-0.7
6,377,576	-		PFLU_RS28660	0.38	+0.3
6,377,576	-		PFLU_RS28660	0.38	-0.1
6,377,576	-		PFLU_RS28660	0.38	+0.4
6,377,576	-		PFLU_RS28660	0.38	+1.3
6,377,804	+				+0.5
6,377,816	+				+1.5
6,377,816	+				+1.9
6,377,816	+				+0.2
6,377,816	+				-0.3
6,377,816	+				-1.3
6,377,817	-				+0.2
6,377,817	-				+0.4
6,377,817	-				+0.3
6,377,845	+				+1.7
6,377,865	+				+0.3
6,377,865	+				-0.4
6,377,866	-				+0.3
6,377,866	-				-0.5
6,377,891	+				-1.5
6,377,891	+				-2.2
6,377,891	+				-2.0
6,377,891	+				-0.2
6,377,892	-				-1.5
6,377,892	-				-2.2
6,377,892	-				-0.8
6,377,892	-				-0.9
6,377,918	+				+1.0
6,377,919	-				-0.4
6,378,023	+				-1.0
6,378,063	+		PFLU_RS28665	0.13	-1.1
6,378,153	+		PFLU_RS28665	0.19	+0.5
6,378,153	+		PFLU_RS28665	0.19	-1.2
6,378,153	+		PFLU_RS28665	0.19	+0.4
6,378,153	+		PFLU_RS28665	0.19	-0.4
6,378,153	+		PFLU_RS28665	0.19	-0.7
6,378,153	+		PFLU_RS28665	0.19	-2.1
6,378,154	-		PFLU_RS28665	0.19	-1.9
6,378,154	-		PFLU_RS28665	0.19	-0.7
6,378,311	+		PFLU_RS28665	0.29	-2.2
6,378,311	+		PFLU_RS28665	0.29	-2.8
6,378,311	+		PFLU_RS28665	0.29	-0.4
6,378,311	+		PFLU_RS28665	0.29	-1.0
6,378,311	+		PFLU_RS28665	0.29	-0.1
6,378,312	-		PFLU_RS28665	0.29	-2.5
6,378,312	-		PFLU_RS28665	0.29	+1.2
6,378,312	-		PFLU_RS28665	0.29	-3.1
6,378,312	-		PFLU_RS28665	0.29	-2.7
6,378,487	+		PFLU_RS28665	0.41	-0.7
6,378,487	+		PFLU_RS28665	0.41	-1.2
6,378,488	-		PFLU_RS28665	0.41	-1.2
6,378,488	-		PFLU_RS28665	0.41	-1.7
6,378,521	+		PFLU_RS28665	0.43	-1.9
6,378,521	+		PFLU_RS28665	0.43	-1.1
6,378,521	+		PFLU_RS28665	0.43	-2.6
6,378,521	+		PFLU_RS28665	0.43	-3.1
6,378,521	+		PFLU_RS28665	0.43	-1.1
6,378,522	-		PFLU_RS28665	0.43	-0.4
6,378,584	+		PFLU_RS28665	0.47	-1.2
6,378,584	+		PFLU_RS28665	0.47	-0.9
6,378,584	+		PFLU_RS28665	0.47	-1.7
6,378,584	+		PFLU_RS28665	0.47	-2.5
6,378,584	+		PFLU_RS28665	0.47	-1.7
6,378,585	-		PFLU_RS28665	0.47	-1.4
6,378,585	-		PFLU_RS28665	0.47	+0.2
6,378,585	-		PFLU_RS28665	0.47	-1.0
6,378,585	-		PFLU_RS28665	0.47	-2.5
6,378,585	-		PFLU_RS28665	0.47	-1.2
6,378,585	-		PFLU_RS28665	0.47	-1.0
6,378,627	+		PFLU_RS28665	0.50	-1.8
6,378,628	-		PFLU_RS28665	0.50	-2.8
6,378,644	+		PFLU_RS28665	0.51	-1.4
6,378,644	+		PFLU_RS28665	0.51	-2.7
6,378,644	+		PFLU_RS28665	0.51	-0.7
6,378,644	+		PFLU_RS28665	0.51	-2.4
6,378,644	+		PFLU_RS28665	0.51	-3.3
6,378,644	+		PFLU_RS28665	0.51	-3.7
6,378,644	+		PFLU_RS28665	0.51	-1.5
6,378,644	+		PFLU_RS28665	0.51	-2.5
6,378,644	+		PFLU_RS28665	0.51	-1.4
6,378,644	+		PFLU_RS28665	0.51	-2.4
6,378,644	+		PFLU_RS28665	0.51	-5.0
6,378,644	+		PFLU_RS28665	0.51	-1.8
6,378,644	+		PFLU_RS28665	0.51	+1.5
6,378,644	+		PFLU_RS28665	0.51	-1.4
6,378,644	+		PFLU_RS28665	0.51	+0.5
6,378,644	+		PFLU_RS28665	0.51	-1.2
6,378,644	+		PFLU_RS28665	0.51	-1.5
6,378,644	+		PFLU_RS28665	0.51	-1.0
6,378,644	+		PFLU_RS28665	0.51	-2.0
6,378,644	+		PFLU_RS28665	0.51	+0.5
6,378,644	+		PFLU_RS28665	0.51	-2.5
6,378,644	+		PFLU_RS28665	0.51	-2.1
6,378,644	+		PFLU_RS28665	0.51	-0.8
6,378,644	+		PFLU_RS28665	0.51	-1.4
6,378,644	+		PFLU_RS28665	0.51	+0.2
6,378,644	+		PFLU_RS28665	0.51	-2.2
6,378,645	-		PFLU_RS28665	0.51	-2.3
6,378,645	-		PFLU_RS28665	0.51	-2.3
6,378,645	-		PFLU_RS28665	0.51	-0.2
6,378,645	-		PFLU_RS28665	0.51	-2.7
6,378,645	-		PFLU_RS28665	0.51	-3.2
6,378,645	-		PFLU_RS28665	0.51	-1.5
6,378,645	-		PFLU_RS28665	0.51	+1.4
6,378,645	-		PFLU_RS28665	0.51	+0.3
6,378,645	-		PFLU_RS28665	0.51	-1.0
6,378,645	-		PFLU_RS28665	0.51	-0.2
6,378,645	-		PFLU_RS28665	0.51	-3.6
6,378,645	-		PFLU_RS28665	0.51	-2.9
6,378,645	-		PFLU_RS28665	0.51	+0.0
6,378,645	-		PFLU_RS28665	0.51	-3.1
6,378,645	-		PFLU_RS28665	0.51	-2.0
6,378,666	+		PFLU_RS28665	0.52	-0.6
6,378,666	+		PFLU_RS28665	0.52	-0.0
6,378,666	+		PFLU_RS28665	0.52	-1.5
6,378,666	+		PFLU_RS28665	0.52	-3.7
6,378,666	+		PFLU_RS28665	0.52	-1.5
6,378,666	+		PFLU_RS28665	0.52	-0.5
6,378,666	+		PFLU_RS28665	0.52	-0.5
6,378,666	+		PFLU_RS28665	0.52	+0.0
6,378,666	+		PFLU_RS28665	0.52	-2.5
6,378,666	+		PFLU_RS28665	0.52	+0.6
6,378,667	-		PFLU_RS28665	0.52	-0.5
6,378,667	-		PFLU_RS28665	0.52	-0.0
6,378,667	-		PFLU_RS28665	0.52	+0.2
6,378,667	-		PFLU_RS28665	0.52	-1.9
6,378,667	-		PFLU_RS28665	0.52	-0.1
6,378,667	-		PFLU_RS28665	0.52	-1.3
6,378,667	-		PFLU_RS28665	0.52	-1.8
6,378,667	-		PFLU_RS28665	0.52	-2.4
6,378,667	-		PFLU_RS28665	0.52	-1.8
6,378,667	-		PFLU_RS28665	0.52	-4.0
6,378,724	+		PFLU_RS28665	0.56	-3.7
6,378,724	+		PFLU_RS28665	0.56	-1.8
6,378,725	-		PFLU_RS28665	0.56	+0.2
6,378,812	+		PFLU_RS28665	0.62	-1.4
6,378,812	+		PFLU_RS28665	0.62	-1.0
6,378,812	+		PFLU_RS28665	0.62	-1.6
6,378,812	+		PFLU_RS28665	0.62	-1.0
6,378,812	+		PFLU_RS28665	0.62	-1.9
6,378,813	-		PFLU_RS28665	0.62	-2.9
6,378,813	-		PFLU_RS28665	0.62	-0.9
6,378,813	-		PFLU_RS28665	0.62	-1.4
6,378,821	+		PFLU_RS28665	0.63	-0.9
6,378,822	-		PFLU_RS28665	0.63	-1.5
6,378,863	-		PFLU_RS28665	0.65	-1.7
6,378,962	+		PFLU_RS28665	0.72	-3.5
6,378,962	+		PFLU_RS28665	0.72	-1.2
6,378,962	+		PFLU_RS28665	0.72	-2.1
6,378,962	+		PFLU_RS28665	0.72	-2.1
6,378,962	+		PFLU_RS28665	0.72	-2.2
6,378,962	+		PFLU_RS28665	0.72	+0.5
6,378,962	+		PFLU_RS28665	0.72	-2.3
6,378,962	+		PFLU_RS28665	0.72	-3.4
6,378,962	+		PFLU_RS28665	0.72	+1.9
6,378,962	+		PFLU_RS28665	0.72	-0.5
6,378,962	+		PFLU_RS28665	0.72	-0.2
6,378,962	+		PFLU_RS28665	0.72	-0.7
6,378,962	+		PFLU_RS28665	0.72	-2.3
6,378,963	-		PFLU_RS28665	0.72	-1.8
6,378,963	-		PFLU_RS28665	0.72	+2.0
6,378,963	-		PFLU_RS28665	0.72	-1.7
6,378,963	-		PFLU_RS28665	0.72	-1.6
6,378,963	-		PFLU_RS28665	0.72	-0.9
6,378,963	-		PFLU_RS28665	0.72	-1.5
6,378,963	-		PFLU_RS28665	0.72	+0.6
6,378,963	-		PFLU_RS28665	0.72	-1.3
6,378,963	-		PFLU_RS28665	0.72	-2.5
6,378,963	-		PFLU_RS28665	0.72	-1.5
6,378,963	-		PFLU_RS28665	0.72	-1.2
6,378,963	-		PFLU_RS28665	0.72	-1.8
6,378,963	-		PFLU_RS28665	0.72	-2.6
6,378,968	+		PFLU_RS28665	0.72	-2.2
6,378,968	+		PFLU_RS28665	0.72	-2.1
6,378,968	+		PFLU_RS28665	0.72	-2.1
6,378,968	+		PFLU_RS28665	0.72	-0.0
6,378,968	+		PFLU_RS28665	0.72	-2.0
6,378,969	-		PFLU_RS28665	0.72	-1.1
6,378,969	-		PFLU_RS28665	0.72	+0.3
6,378,998	+		PFLU_RS28665	0.74	-1.2
6,378,999	-		PFLU_RS28665	0.74	-2.7
6,378,999	-		PFLU_RS28665	0.74	-1.6
6,378,999	-		PFLU_RS28665	0.74	-0.4
6,379,218	+		PFLU_RS28665	0.89	-3.5
6,379,218	+		PFLU_RS28665	0.89	-1.0
6,379,218	+		PFLU_RS28665	0.89	+0.6
6,379,219	-		PFLU_RS28665	0.89	-1.1
6,379,219	-		PFLU_RS28665	0.89	-1.7
6,379,219	-		PFLU_RS28665	0.89	-4.1
6,379,220	+		PFLU_RS28665	0.89	-1.3
6,379,220	+		PFLU_RS28665	0.89	-1.1
6,379,221	-		PFLU_RS28665	0.89	-2.1
6,379,221	-		PFLU_RS28665	0.89	-0.3
6,379,221	-		PFLU_RS28665	0.89	+0.2
6,379,330	+				-2.3
6,379,331	-				-3.1
6,379,331	-				-2.5
6,379,343	+				-3.7
6,379,343	+				-3.0
6,379,373	+				-4.2
6,379,373	+				-0.0
6,379,373	+				-1.9
6,379,373	+				-1.4
6,379,373	+				-3.2
6,379,373	+				-2.1
6,379,373	+				-0.9
6,379,373	+				-0.4
6,379,373	+				-2.8
6,379,373	+				-1.5
6,379,373	+				-1.9
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6,379,374	-				-1.8
6,379,374	-				-0.9
6,379,374	-				-3.9
6,379,374	-				-2.1
6,379,374	-				-1.1
6,379,374	-				-2.0
6,379,374	-				-1.9
6,379,374	-				-2.6
6,379,374	-				-3.2
6,379,374	-				-2.5
6,379,374	-				-1.0
6,379,374	-				-1.4
6,379,428	+				+1.4
6,379,479	+				-1.4
6,379,479	+				-1.9
6,379,479	+				+0.8
6,379,479	+				+1.9
6,379,480	-				+0.1
6,379,480	-				-0.1
6,379,480	-				-1.6
6,379,481	+				+0.9
6,379,481	+				-1.2
6,379,481	+				+0.3
6,379,481	+				-0.9
6,379,481	+				+0.4
6,379,481	+				-1.9
6,379,482	-				+0.5
6,379,482	-				+1.8
6,379,482	-				-2.3
6,379,482	-				+0.9
6,379,482	-				-0.4
6,379,482	-				-3.0
6,379,482	-				-1.0
6,379,482	-				-0.4
6,379,497	+				+0.1
6,380,206	+				+0.6
6,380,207	-				+1.5
6,380,247	+				+0.1
6,380,247	+				+0.8
6,380,247	+				-0.4
6,380,247	+				-0.5
6,380,247	+				-1.1
6,380,247	+				-0.2
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6,380,247	+				-0.7
6,380,247	+				-0.0
6,380,247	+				-0.2
6,380,247	+				-0.8
6,380,247	+				-0.2
6,380,247	+				+0.4
6,380,247	+				-0.3
6,380,248	-				-0.4
6,380,248	-				-1.9
6,380,248	-				-0.3
6,380,248	-				+0.0
6,380,248	-				+0.2
6,380,248	-				+0.5
6,380,248	-				-1.5
6,380,248	-				+0.7
6,380,248	-				+0.1
6,380,274	+				+0.9
6,380,274	+				+0.1
6,380,274	+				+1.8
6,380,274	+				-2.1
6,380,274	+				-0.0
6,380,274	+				-2.2
6,380,275	-				-0.9
6,380,275	-				+0.4
6,380,275	-				-1.1
6,380,275	-				-0.4