Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c26580

Experiment: m.b. syringaldehyde 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. syringaldehyde 2 mM
2,770,758	-		PGA1_c26570	0.60	+2.7
2,770,818	-		PGA1_c26570	0.66	-0.4
2,770,847	-		PGA1_c26570	0.69	+0.5
2,770,847	-		PGA1_c26570	0.69	-1.6
2,770,914	-		PGA1_c26570	0.77	+2.3
2,770,937	+		PGA1_c26570	0.79	-0.9
2,770,991	+		PGA1_c26570	0.85	+0.6
2,770,999	-		PGA1_c26570	0.86	-0.2
2,771,011	-		PGA1_c26570	0.87	+1.7
2,771,117	+				-0.8
2,771,177	-				-0.9
2,771,182	-				-1.0
2,771,193	-				+1.0
2,771,208	+				-0.3
2,771,239	+				-1.5
2,771,333	+				-0.2
2,771,423	+				+0.0
2,771,423	+				+0.7
2,771,423	+				-0.9
2,771,423	+				-1.1
2,771,431	-				+0.5
2,771,431	-				-1.1
2,771,431	-				+0.7
2,771,431	-				+0.2
2,771,431	-				+0.3
2,771,431	-				-2.6
2,771,431	-				+0.9
2,771,431	-				+0.6
2,771,431	-				+1.4
2,771,431	-				-0.4
2,771,443	+				+0.1
2,771,451	-				+0.1
2,771,451	-				-0.1
2,771,451	-				+0.5
2,771,451	-				-0.8
2,771,451	-				-0.2
2,771,511	+				-0.0
2,771,814	+				+0.7
2,771,814	-				-0.6
2,771,877	-				+0.7
2,771,881	-				+0.4
2,771,965	+		PGA1_c26580	0.15	+0.5
2,771,998	-		PGA1_c26580	0.17	+0.4
2,772,039	-		PGA1_c26580	0.19	-0.4
2,772,039	-		PGA1_c26580	0.19	-0.6
2,772,058	+		PGA1_c26580	0.20	+0.6
2,772,058	+		PGA1_c26580	0.20	-0.7
2,772,061	-		PGA1_c26580	0.21	+0.5
2,772,066	-		PGA1_c26580	0.21	+0.2
2,772,066	-		PGA1_c26580	0.21	+1.6
2,772,077	-		PGA1_c26580	0.21	+0.5
2,772,135	+		PGA1_c26580	0.25	+1.5
2,772,135	+		PGA1_c26580	0.25	+1.5
2,772,149	+		PGA1_c26580	0.26	+0.8
2,772,248	+		PGA1_c26580	0.32	-0.1
2,772,268	-		PGA1_c26580	0.33	-0.1
2,772,303	-		PGA1_c26580	0.35	-0.4
2,772,322	-		PGA1_c26580	0.36	+1.3
2,772,349	+		PGA1_c26580	0.38	-0.1
2,772,369	+		PGA1_c26580	0.39	-0.1
2,772,425	+		PGA1_c26580	0.42	-0.9
2,772,461	+		PGA1_c26580	0.44	-0.2
2,772,461	+		PGA1_c26580	0.44	+0.1
2,772,469	-		PGA1_c26580	0.45	-1.2
2,772,560	+		PGA1_c26580	0.50	+0.4
2,772,560	+		PGA1_c26580	0.50	+0.1
2,772,600	-		PGA1_c26580	0.52	+0.7
2,772,600	-		PGA1_c26580	0.52	-0.9
2,772,624	+		PGA1_c26580	0.54	-1.2
2,772,714	+		PGA1_c26580	0.59	+1.1
2,772,722	-		PGA1_c26580	0.60	-1.5
2,772,800	+		PGA1_c26580	0.64	-0.1
2,772,902	+		PGA1_c26580	0.70	+0.7
2,772,917	-		PGA1_c26580	0.71	+0.8
2,772,918	+		PGA1_c26580	0.71	-0.4
2,772,918	+		PGA1_c26580	0.71	-0.4
2,772,919	-		PGA1_c26580	0.71	+0.2
2,773,061	-		PGA1_c26580	0.80	-0.2
2,773,062	-		PGA1_c26580	0.80	-2.9
2,773,143	-		PGA1_c26580	0.85	+0.6
2,773,255	+				-1.1
2,773,267	-				+0.7
2,773,323	+				-0.9
2,773,328	+				-0.4
2,773,328	+				+0.2
2,773,338	+				-0.3
2,773,346	-				+0.1
2,773,435	-				-2.1
2,773,484	+				-0.4
2,773,494	+				+0.3
2,773,538	+				+0.7
2,773,591	+				+0.1
2,773,591	+				-0.2
2,773,593	+				+2.0
2,773,599	-				-0.5
2,773,599	-				+0.8
2,773,718	+				-0.6
2,773,726	-		PGA1_c26590	0.10	-0.4
2,773,726	-		PGA1_c26590	0.10	-0.6
2,773,726	-		PGA1_c26590	0.10	+0.5
2,773,737	+		PGA1_c26590	0.11	-2.0
2,773,745	-		PGA1_c26590	0.11	-1.5
2,773,750	-		PGA1_c26590	0.11	-0.4
2,773,784	-		PGA1_c26590	0.13	-1.5
2,773,839	-		PGA1_c26590	0.16	+0.6
2,773,868	+		PGA1_c26590	0.17	+3.0
2,773,874	-		PGA1_c26590	0.17	-0.8
2,773,961	-		PGA1_c26590	0.22	+1.1
2,774,035	-		PGA1_c26590	0.25	+1.0
2,774,036	+		PGA1_c26590	0.25	-0.9
2,774,080	-		PGA1_c26590	0.28	+1.1
2,774,109	-		PGA1_c26590	0.29	-0.2
2,774,131	+		PGA1_c26590	0.30	-0.6
2,774,197	+		PGA1_c26590	0.33	+0.8
2,774,197	+		PGA1_c26590	0.33	-1.0
2,774,197	+		PGA1_c26590	0.33	-0.4
2,774,205	-		PGA1_c26590	0.34	-1.0
2,774,231	+		PGA1_c26590	0.35	+0.4
2,774,239	-		PGA1_c26590	0.35	+0.2
2,774,246	-		PGA1_c26590	0.36	-0.1
2,774,265	+		PGA1_c26590	0.37	-1.9
2,774,295	-		PGA1_c26590	0.38	+2.0
2,774,360	+		PGA1_c26590	0.41	+0.6
2,774,368	-		PGA1_c26590	0.42	-0.9