Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12220

Experiment: m.b. syringaldehyde 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. syringaldehyde 2 mM
1,267,879	+		PGA1_c12210	0.59	+0.5
1,267,879	+		PGA1_c12210	0.59	+1.1
1,267,887	-		PGA1_c12210	0.59	-0.4
1,267,907	-		PGA1_c12210	0.60	+0.7
1,267,944	+		PGA1_c12210	0.62	+0.0
1,267,983	-		PGA1_c12210	0.64	+0.1
1,267,993	-		PGA1_c12210	0.64	+0.1
1,268,011	+		PGA1_c12210	0.65	-0.0
1,268,011	+		PGA1_c12210	0.65	+1.9
1,268,019	-		PGA1_c12210	0.66	-0.6
1,268,097	-		PGA1_c12210	0.69	+1.8
1,268,119	+		PGA1_c12210	0.70	-0.1
1,268,129	+		PGA1_c12210	0.71	+0.5
1,268,146	+		PGA1_c12210	0.71	+1.1
1,268,160	+		PGA1_c12210	0.72	-0.3
1,268,160	+		PGA1_c12210	0.72	-0.5
1,268,168	-		PGA1_c12210	0.72	-0.1
1,268,196	+		PGA1_c12210	0.74	+0.8
1,268,197	-		PGA1_c12210	0.74	+0.6
1,268,245	+		PGA1_c12210	0.76	-0.7
1,268,245	+		PGA1_c12210	0.76	-1.9
1,268,245	+		PGA1_c12210	0.76	-1.0
1,268,253	-		PGA1_c12210	0.76	+0.6
1,268,313	+		PGA1_c12210	0.79	+0.3
1,268,313	+		PGA1_c12210	0.79	-1.1
1,268,333	+		PGA1_c12210	0.80	+0.6
1,268,384	+		PGA1_c12210	0.82	+0.5
1,268,385	-		PGA1_c12210	0.82	-0.1
1,268,392	-		PGA1_c12210	0.83	+0.4
1,268,392	-		PGA1_c12210	0.83	-0.7
1,268,471	-		PGA1_c12210	0.86	-1.2
1,268,609	+				+0.8
1,268,675	+				-0.7
1,268,690	+				+0.8
1,268,690	+				-0.1
1,268,693	-				-0.5
1,268,698	-				-0.5
1,268,790	-				-0.4
1,268,850	+				+0.3
1,268,857	+				-0.4
1,268,857	+				-0.3
1,268,857	+				+0.6
1,268,865	-				-0.6
1,268,865	-				+1.2
1,268,876	+				+0.8
1,268,904	+		PGA1_c12220	0.14	-1.7
1,268,906	-		PGA1_c12220	0.14	-1.1
1,268,906	-		PGA1_c12220	0.14	-1.9
1,268,906	-		PGA1_c12220	0.14	+1.5
1,268,911	-		PGA1_c12220	0.15	-0.8
1,268,911	-		PGA1_c12220	0.15	-0.3