Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11960

Experiment: m.b. syringaldehyde 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. syringaldehyde 2 mM
1,241,647	+		PGA1_c11950	0.33	-0.6
1,241,655	-		PGA1_c11950	0.33	-0.8
1,241,664	+		PGA1_c11950	0.34	-2.6
1,241,706	-		PGA1_c11950	0.38	+0.3
1,241,762	+		PGA1_c11950	0.42	-0.8
1,241,762	+		PGA1_c11950	0.42	-0.9
1,241,768	+		PGA1_c11950	0.43	+0.4
1,241,769	-		PGA1_c11950	0.43	-1.9
1,241,838	+		PGA1_c11950	0.48	-0.7
1,241,838	+		PGA1_c11950	0.48	-0.3
1,241,903	-		PGA1_c11950	0.54	-0.2
1,241,914	-		PGA1_c11950	0.55	+0.0
1,241,924	-		PGA1_c11950	0.55	-0.4
1,241,950	-		PGA1_c11950	0.57	-1.8
1,242,167	+		PGA1_c11950	0.75	-0.4
1,242,175	-		PGA1_c11950	0.76	-1.7
1,242,221	-		PGA1_c11950	0.80	-0.8
1,242,241	+		PGA1_c11950	0.81	-3.0
1,242,249	-		PGA1_c11950	0.82	-0.7
1,242,289	-		PGA1_c11950	0.85	-1.2
1,242,314	+		PGA1_c11950	0.87	+0.9
1,242,418	+				+0.3
1,242,428	+				-1.1
1,242,428	+				+1.3
1,242,431	-				+0.0
1,242,449	+				-1.6
1,242,449	+				+0.2
1,242,449	+				+0.4
1,242,457	-				+0.3
1,242,463	+				-0.4
1,242,557	+				+1.1
1,242,557	+				-0.3
1,242,572	+				-0.0
1,242,572	+				-0.3
1,242,572	+				-0.8
1,242,572	+				-0.2
1,242,580	-				+2.7
1,242,580	-				+0.5
1,242,627	-				+0.9
1,242,654	-				-0.7
1,242,656	+				+0.5
1,242,765	-		PGA1_c11960	0.24	+0.1
1,243,009	+		PGA1_c11960	0.63	-0.8
1,243,028	+		PGA1_c11960	0.66	+0.3
1,243,028	+		PGA1_c11960	0.66	+1.9
1,243,050	+		PGA1_c11960	0.70	-0.2
1,243,050	+		PGA1_c11960	0.70	-1.0
1,243,050	+		PGA1_c11960	0.70	-1.8
1,243,109	+		PGA1_c11960	0.79	+0.5
1,243,109	+		PGA1_c11960	0.79	-0.4
1,243,133	+		PGA1_c11960	0.83	+0.9
1,243,166	+		PGA1_c11960	0.88	-0.7
1,243,168	-		PGA1_c11960	0.88	-1.2
1,243,194	-				+1.5
1,243,201	+				+1.8
1,243,202	+				-1.9
1,243,300	+				-0.9
1,243,305	+				+0.9
1,243,331	+				-0.6
1,243,331	+				-0.8
1,243,331	+				-0.9
1,243,331	+				-2.2
1,243,339	-				+0.6
1,243,351	+				+0.6
1,243,351	+				-0.7
1,243,522	+				+0.9
1,243,562	+				+0.9
1,243,562	+				+0.5
1,243,562	+				+0.6
1,243,562	+				+0.5
1,243,570	-				-0.7
1,243,570	-				-0.6
1,243,608	-		PGA1_c11970	0.12	+0.4
1,243,724	+		PGA1_c11970	0.21	-0.1
1,243,732	-		PGA1_c11970	0.21	-0.2
1,243,793	+		PGA1_c11970	0.26	+1.5
1,243,806	-		PGA1_c11970	0.27	+0.3
1,243,886	+		PGA1_c11970	0.33	-0.1
1,243,889	-		PGA1_c11970	0.33	+0.2
1,243,936	+		PGA1_c11970	0.37	-0.7
1,243,989	+		PGA1_c11970	0.41	+0.0
1,244,043	+		PGA1_c11970	0.45	+0.2
1,244,079	-		PGA1_c11970	0.48	-0.5
1,244,095	+		PGA1_c11970	0.49	+0.4
1,244,095	+		PGA1_c11970	0.49	+0.5
1,244,103	-		PGA1_c11970	0.49	+0.8
1,244,127	-		PGA1_c11970	0.51	+1.3
1,244,161	-		PGA1_c11970	0.54	-3.0
1,244,163	+		PGA1_c11970	0.54	-0.4