Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11940

Experiment: m.b. syringaldehyde 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. syringaldehyde 2 mM
1,238,995	+		PGA1_c11920	0.63	+0.9
1,238,995	+		PGA1_c11920	0.63	-0.5
1,238,995	+		PGA1_c11920	0.63	-2.6
1,239,003	-		PGA1_c11920	0.63	-1.4
1,239,007	+		PGA1_c11920	0.64	+0.0
1,239,015	-		PGA1_c11920	0.65	+0.5
1,239,062	-		PGA1_c11920	0.69	-0.5
1,239,092	+		PGA1_c11920	0.72	-0.5
1,239,127	+		PGA1_c11920	0.75	-0.9
1,239,127	+		PGA1_c11920	0.75	+0.5
1,239,127	-		PGA1_c11920	0.75	+1.1
1,239,144	+		PGA1_c11920	0.76	+0.8
1,239,196	-		PGA1_c11920	0.81	+1.0
1,239,245	+		PGA1_c11920	0.86	+0.9
1,239,253	-		PGA1_c11920	0.86	+0.6
1,239,253	-		PGA1_c11920	0.86	+0.2
1,239,277	+		PGA1_c11920	0.88	+0.0
1,239,360	+				+0.4
1,239,360	+				+0.2
1,239,368	-				-1.1
1,239,370	+				+1.4
1,239,438	+				-0.3
1,239,438	+				-0.7
1,239,455	+				+0.9
1,239,477	-				+0.4
1,239,486	-				-0.2
1,239,499	-				+0.0
1,239,580	+				-1.5
1,239,619	+		PGA1_c11930	0.20	-0.1
1,239,639	-		PGA1_c11930	0.25	-1.1
1,239,649	-		PGA1_c11930	0.27	-0.1
1,239,675	+		PGA1_c11930	0.34	+1.0
1,239,675	+		PGA1_c11930	0.34	+0.0
1,239,675	+		PGA1_c11930	0.34	-0.4
1,239,675	+		PGA1_c11930	0.34	-0.4
1,239,683	-		PGA1_c11930	0.36	-0.5
1,239,685	+		PGA1_c11930	0.36	-1.6
1,239,740	-		PGA1_c11930	0.50	-0.8
1,239,844	-		PGA1_c11930	0.77	-0.5
1,239,846	-		PGA1_c11930	0.77	+0.7
1,239,914	+				-0.9
1,239,995	+				-0.7
1,240,003	-				-0.5
1,240,016	+				-0.7
1,240,151	+		PGA1_c11940	0.16	-0.3
1,240,303	+		PGA1_c11940	0.28	-1.4
1,240,326	+		PGA1_c11940	0.30	+1.8
1,240,334	-		PGA1_c11940	0.30	-0.0
1,240,380	-		PGA1_c11940	0.34	+1.2
1,240,452	+		PGA1_c11940	0.39	+0.6
1,240,459	-		PGA1_c11940	0.40	-0.5
1,240,461	+		PGA1_c11940	0.40	-0.6
1,240,461	+		PGA1_c11940	0.40	-1.1
1,240,517	-		PGA1_c11940	0.44	-0.5
1,240,570	-		PGA1_c11940	0.48	-1.0
1,240,605	-		PGA1_c11940	0.51	-0.4
1,240,634	+		PGA1_c11940	0.53	-1.4
1,240,637	-		PGA1_c11940	0.53	-1.6
1,240,699	+		PGA1_c11940	0.58	-0.6
1,240,788	-		PGA1_c11940	0.65	+0.3
1,240,901	-		PGA1_c11940	0.73	-0.3
1,240,961	-		PGA1_c11940	0.78	-0.5
1,240,981	-		PGA1_c11940	0.80	-0.3
1,240,981	-		PGA1_c11940	0.80	-1.0
1,240,981	-		PGA1_c11940	0.80	-0.1
1,241,001	+		PGA1_c11940	0.81	+0.1
1,241,007	+		PGA1_c11940	0.82	+0.3
1,241,008	-		PGA1_c11940	0.82	+1.4
1,241,015	-		PGA1_c11940	0.82	-0.2
1,241,015	-		PGA1_c11940	0.82	+2.2
1,241,130	-				+1.8
1,241,130	-				-1.9
1,241,186	+				-0.2
1,241,197	+				-1.2
1,241,197	+				-0.9
1,241,207	+				-0.4
1,241,215	-				-1.8
1,241,220	-				-1.2
1,241,222	+				-0.6
1,241,222	+				-0.5
1,241,222	+				-2.6
1,241,266	-				-2.2
1,241,370	+		PGA1_c11950	0.10	-0.6
1,241,370	+		PGA1_c11950	0.10	-0.3
1,241,378	+		PGA1_c11950	0.11	-1.1
1,241,378	-		PGA1_c11950	0.11	+1.2
1,241,408	-		PGA1_c11950	0.13	-1.1
1,241,541	+		PGA1_c11950	0.24	-0.3
1,241,589	+		PGA1_c11950	0.28	+0.7
1,241,601	+		PGA1_c11950	0.29	-1.4
1,241,601	+		PGA1_c11950	0.29	-1.1
1,241,647	+		PGA1_c11950	0.33	-0.6
1,241,655	-		PGA1_c11950	0.33	-0.8
1,241,664	+		PGA1_c11950	0.34	-2.6
1,241,706	-		PGA1_c11950	0.38	+0.3
1,241,762	+		PGA1_c11950	0.42	-0.8
1,241,762	+		PGA1_c11950	0.42	-0.9
1,241,768	+		PGA1_c11950	0.43	+0.4
1,241,769	-		PGA1_c11950	0.43	-1.9
1,241,838	+		PGA1_c11950	0.48	-0.7
1,241,838	+		PGA1_c11950	0.48	-0.3
1,241,903	-		PGA1_c11950	0.54	-0.2
1,241,914	-		PGA1_c11950	0.55	+0.0
1,241,924	-		PGA1_c11950	0.55	-0.4
1,241,950	-		PGA1_c11950	0.57	-1.8
1,242,167	+		PGA1_c11950	0.75	-0.4
1,242,175	-		PGA1_c11950	0.76	-1.7
1,242,221	-		PGA1_c11950	0.80	-0.8
1,242,241	+		PGA1_c11950	0.81	-3.0