Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1900

Experiment: BG11 with Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.5 mg/ml
1,972,223	+				+0.9
1,972,259	+				+0.5
1,972,259	+				+0.2
1,972,265	-				+0.7
1,972,267	-				-1.0
1,972,340	-		Synpcc7942_1899	0.10	-0.8
1,972,342	-		Synpcc7942_1899	0.11	-0.3
1,972,392	+		Synpcc7942_1899	0.21	-0.3
1,972,398	+		Synpcc7942_1899	0.22	+0.2
1,972,400	+		Synpcc7942_1899	0.22	-0.8
1,972,400	+				+0.7
1,972,481	-		Synpcc7942_1899	0.39	+0.2
1,972,488	+		Synpcc7942_1899	0.40	+0.6
1,972,490	+		Synpcc7942_1899	0.41	+0.7
1,972,490	+		Synpcc7942_1899	0.41	-0.5
1,972,495	+		Synpcc7942_1899	0.42	-1.3
1,972,498	-		Synpcc7942_1899	0.43	+0.3
1,972,521	-		Synpcc7942_1899	0.47	-0.1
1,972,521	-		Synpcc7942_1899	0.47	+0.0
1,972,523	+		Synpcc7942_1899	0.48	+0.2
1,972,523	+		Synpcc7942_1899	0.48	+1.7
1,972,523	+		Synpcc7942_1899	0.48	-0.3
1,972,531	-		Synpcc7942_1899	0.49	-1.8
1,972,531	-		Synpcc7942_1899	0.49	+0.3
1,972,531	-		Synpcc7942_1899	0.49	-1.2
1,972,531	-		Synpcc7942_1899	0.49	+0.3
1,972,536	-		Synpcc7942_1899	0.50	+0.6
1,972,546	+		Synpcc7942_1899	0.52	-1.6
1,972,546	+		Synpcc7942_1899	0.52	-0.1
1,972,551	+		Synpcc7942_1899	0.53	-1.4
1,972,554	-		Synpcc7942_1899	0.54	-0.3
1,972,566	-		Synpcc7942_1899	0.56	-0.5
1,972,642	-		Synpcc7942_1899	0.72	+0.2
1,972,661	-		Synpcc7942_1899	0.76	+0.2
1,972,676	+		Synpcc7942_1899	0.79	-0.4
1,972,677	-		Synpcc7942_1899	0.79	-0.3
1,972,742	-				-1.0
1,972,747	+				-0.3
1,972,762	+				+2.3
1,972,762	-				+3.7
1,972,762	-				-0.1
1,972,770	-				+0.0
1,972,809	-				+0.6
1,973,397	+				+0.8
1,973,407	+				-0.4
1,973,407	+				+0.7
1,973,415	-				-2.4
1,973,415	-				+0.5
1,973,415	-				+1.0
1,973,494	-				-2.7
1,973,867	-		Synpcc7942_1901	0.17	-1.3
1,974,301	-		Synpcc7942_1901	0.35	-2.9