Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1874

Experiment: BG11 with Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.5 mg/ml
1,945,241	+		Synpcc7942_1872	0.89	+0.2
1,945,249	-		Synpcc7942_1872	0.90	-0.1
1,945,264	+				-0.1
1,945,274	+				+0.7
1,945,274	+				+0.6
1,945,274	+				+0.7
1,945,280	+				+0.8
1,945,288	-				+0.7
1,945,313	+				+0.7
1,945,323	+				-0.5
1,945,335	+				-0.2
1,945,336	+				-0.3
1,945,336	+				-1.4
1,945,343	-				-0.6
1,945,343	-				+0.9
1,945,346	+				+0.5
1,945,498	+		Synpcc7942_1873	0.15	+0.1
1,945,505	-		Synpcc7942_1873	0.16	-1.6
1,945,506	-		Synpcc7942_1873	0.16	-1.1
1,945,506	-		Synpcc7942_1873	0.16	-0.3
1,945,506	-		Synpcc7942_1873	0.16	+1.2
1,945,620	-		Synpcc7942_1873	0.33	-1.3
1,945,677	+		Synpcc7942_1873	0.41	+0.2
1,945,715	-		Synpcc7942_1873	0.47	+1.5
1,945,749	+		Synpcc7942_1873	0.52	+0.6
1,945,760	+		Synpcc7942_1873	0.53	-1.6
1,945,815	-		Synpcc7942_1873	0.62	-0.2
1,945,911	-		Synpcc7942_1873	0.76	-0.6
1,946,046	-				+0.2
1,946,082	+				-0.8
1,946,125	+				+0.7
1,946,146	+				-0.3
1,946,146	+				+0.2
1,946,273	+		Synpcc7942_1874	0.25	-1.0
1,946,281	-		Synpcc7942_1874	0.27	-0.5
1,946,281	-		Synpcc7942_1874	0.27	+0.4
1,946,281	-		Synpcc7942_1874	0.27	-0.5
1,946,419	-		Synpcc7942_1874	0.56	-0.2
1,946,442	-		Synpcc7942_1874	0.61	-0.1
1,946,449	+		Synpcc7942_1874	0.63	-0.5
1,946,456	+		Synpcc7942_1874	0.64	-0.5
1,946,456	-		Synpcc7942_1874	0.64	-0.5
1,946,505	+		Synpcc7942_1874	0.75	-0.6
1,946,508	-		Synpcc7942_1874	0.75	+0.1
1,946,510	+		Synpcc7942_1874	0.76	-1.4
1,946,524	+		Synpcc7942_1874	0.79	-0.1
1,946,535	+		Synpcc7942_1874	0.81	-0.3
1,946,557	+		Synpcc7942_1874	0.86	-0.7
1,946,557	+		Synpcc7942_1874	0.86	+0.4
1,946,565	-		Synpcc7942_1874	0.87	-1.0
1,946,565	-		Synpcc7942_1874	0.87	-1.1
1,946,567	+		Synpcc7942_1874	0.88	-0.7
1,946,678	+				+0.2
1,946,687	+				+1.0
1,946,745	+				-1.3
1,946,754	-				-1.5
1,946,786	+				-2.4
1,946,794	-				-0.4
1,946,798	-				-1.2
1,946,852	+		Synpcc7942_1875	0.11	-1.2
1,946,860	+		Synpcc7942_1875	0.11	-0.4
1,946,862	+		Synpcc7942_1875	0.11	-1.3
1,946,866	+		Synpcc7942_1875	0.12	-1.3
1,946,874	-		Synpcc7942_1875	0.12	-0.7
1,946,887	-		Synpcc7942_1875	0.13	-2.1
1,946,917	+		Synpcc7942_1875	0.15	-1.4
1,946,991	-		Synpcc7942_1875	0.21	-2.6
1,946,997	+		Synpcc7942_1875	0.21	-0.3
1,946,997	+		Synpcc7942_1875	0.21	-1.7
1,947,000	-		Synpcc7942_1875	0.21	-1.2
1,947,084	+		Synpcc7942_1875	0.27	+0.0
1,947,148	+		Synpcc7942_1875	0.32	-2.3
1,947,156	-		Synpcc7942_1875	0.32	-0.2
1,947,217	+		Synpcc7942_1875	0.37	-1.1
1,947,219	-		Synpcc7942_1875	0.37	-1.1
1,947,289	+		Synpcc7942_1875	0.42	-1.9
1,947,303	-		Synpcc7942_1875	0.43	-2.0
1,947,303	-		Synpcc7942_1875	0.43	-2.1
1,947,310	-		Synpcc7942_1875	0.43	-2.4
1,947,312	+		Synpcc7942_1875	0.44	-0.3
1,947,336	-		Synpcc7942_1875	0.45	+1.6
1,947,336	-		Synpcc7942_1875	0.45	-2.1
1,947,352	+		Synpcc7942_1875	0.46	-0.8
1,947,352	+		Synpcc7942_1875	0.46	+0.0
1,947,360	-		Synpcc7942_1875	0.47	+0.0
1,947,398	-		Synpcc7942_1875	0.50	-2.0
1,947,463	+		Synpcc7942_1875	0.54	+0.3
1,947,468	+		Synpcc7942_1875	0.55	-3.4
1,947,468	+		Synpcc7942_1875	0.55	-2.3
1,947,468	+		Synpcc7942_1875	0.55	-1.3
1,947,471	-		Synpcc7942_1875	0.55	-0.6
1,947,471	-		Synpcc7942_1875	0.55	-1.1
1,947,471	-		Synpcc7942_1875	0.55	+0.7
1,947,471	-		Synpcc7942_1875	0.55	-0.8
1,947,473	+		Synpcc7942_1875	0.55	+3.7
1,947,473	+		Synpcc7942_1875	0.55	-0.7
1,947,473	+		Synpcc7942_1875	0.55	-2.5
1,947,476	-		Synpcc7942_1875	0.55	-1.4
1,947,476	-		Synpcc7942_1875	0.55	-1.1
1,947,481	-		Synpcc7942_1875	0.56	-4.2
1,947,481	-		Synpcc7942_1875	0.56	-2.3
1,947,481	-		Synpcc7942_1875	0.56	-3.6
1,947,481	-		Synpcc7942_1875	0.56	-2.1
1,947,481	-		Synpcc7942_1875	0.56	-0.8
1,947,486	-		Synpcc7942_1875	0.56	-2.3
1,947,521	+		Synpcc7942_1875	0.59	-1.0
1,947,533	+		Synpcc7942_1875	0.59	-2.6
1,947,541	-		Synpcc7942_1875	0.60	-2.3
1,947,541	-		Synpcc7942_1875	0.60	-2.4
1,947,550	+		Synpcc7942_1875	0.61	+0.7
1,947,587	+		Synpcc7942_1875	0.63	-1.7
1,947,590	-		Synpcc7942_1875	0.63	-0.5
1,947,595	+		Synpcc7942_1875	0.64	-2.2
1,947,595	-		Synpcc7942_1875	0.64	-2.1
1,947,595	-		Synpcc7942_1875	0.64	+0.3
1,947,595	-		Synpcc7942_1875	0.64	-2.5
1,947,595	-		Synpcc7942_1875	0.64	-1.6
1,947,595	-		Synpcc7942_1875	0.64	-2.0
1,947,597	+		Synpcc7942_1875	0.64	-1.7
1,947,605	-		Synpcc7942_1875	0.65	+0.5
1,947,612	+		Synpcc7942_1875	0.65	-1.0
1,947,620	-		Synpcc7942_1875	0.66	-1.7
1,947,620	-		Synpcc7942_1875	0.66	-0.2