Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1871

Experiment: BG11 with Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.5 mg/ml
1,942,350	+		Synpcc7942_1870	0.64	-1.3
1,942,360	+		Synpcc7942_1870	0.65	-1.0
1,942,365	+		Synpcc7942_1870	0.65	+0.3
1,942,401	+		Synpcc7942_1870	0.68	-0.1
1,942,401	+		Synpcc7942_1870	0.68	+0.3
1,942,401	+		Synpcc7942_1870	0.68	+0.1
1,942,401	+		Synpcc7942_1870	0.68	-0.7
1,942,409	-		Synpcc7942_1870	0.68	+0.5
1,942,409	-		Synpcc7942_1870	0.68	-1.3
1,942,416	+		Synpcc7942_1870	0.69	+0.0
1,942,418	+		Synpcc7942_1870	0.69	+0.6
1,942,439	+		Synpcc7942_1870	0.71	-0.6
1,942,442	-		Synpcc7942_1870	0.71	-0.6
1,942,479	-		Synpcc7942_1870	0.74	-0.3
1,942,486	+		Synpcc7942_1870	0.74	+1.6
1,942,518	+		Synpcc7942_1870	0.77	-0.2
1,942,540	-		Synpcc7942_1870	0.79	-0.9
1,942,560	+		Synpcc7942_1870	0.80	-1.7
1,942,560	+		Synpcc7942_1870	0.80	+0.7
1,942,566	+				+0.3
1,942,592	+		Synpcc7942_1870	0.83	-0.5
1,942,618	-		Synpcc7942_1870	0.85	-1.5
1,942,628	+		Synpcc7942_1870	0.85	+0.2
1,942,632	-		Synpcc7942_1870	0.86	-0.4
1,942,640	+		Synpcc7942_1870	0.86	+0.3
1,942,715	+				+0.6
1,942,785	-				-0.3
1,942,788	+				-0.2
1,942,788	+				-1.0
1,942,788	+				+0.1
1,942,823	+				-0.3
1,942,866	+				+0.0
1,942,868	+				-0.8
1,942,874	-				+0.1
1,942,891	+				-0.0
1,942,891	+				-0.6
1,942,894	-				+0.3
1,942,894	-				-0.6
1,942,899	-				+1.2
1,942,917	-				-0.3
1,942,921	-				+0.1
1,942,942	-				-0.0
1,942,947	+				+1.5
1,943,049	-				+0.1
1,943,059	+				-0.0
1,943,059	-				+0.0
1,943,328	+				+0.1
1,943,372	+		Synpcc7942_1871	0.12	-0.1
1,943,429	-		Synpcc7942_1871	0.23	+0.0
1,943,457	+		Synpcc7942_1871	0.28	+0.6
1,943,527	+		Synpcc7942_1871	0.41	+0.0
1,943,527	+		Synpcc7942_1871	0.41	+0.2
1,943,527	+		Synpcc7942_1871	0.41	-0.3
1,943,535	-		Synpcc7942_1871	0.43	+0.7
1,943,535	-		Synpcc7942_1871	0.43	+1.1
1,943,535	-		Synpcc7942_1871	0.43	+0.2
1,943,535	-		Synpcc7942_1871	0.43	+1.7
1,943,535	-		Synpcc7942_1871	0.43	-0.7
1,943,561	-		Synpcc7942_1871	0.47	-0.7
1,943,571	-		Synpcc7942_1871	0.49	-0.5
1,943,571	-		Synpcc7942_1871	0.49	+0.3
1,943,572	-		Synpcc7942_1871	0.49	+2.7
1,943,646	+		Synpcc7942_1871	0.63	+1.5
1,943,691	+		Synpcc7942_1871	0.72	+0.5
1,943,875	+				-0.3
1,943,883	-				+1.3
1,943,883	-				-0.9
1,943,990	-				-0.8
1,944,030	+				+0.3
1,944,030	+				-0.9
1,944,030	+				-1.5
1,944,030	+				-0.1
1,944,030	+				+0.5
1,944,030	+				-0.5
1,944,030	+				+2.0
1,944,038	-				+0.1
1,944,038	-				-0.6
1,944,038	-				+0.1
1,944,041	+				-0.5
1,944,069	+				+1.3
1,944,075	+				-0.3
1,944,107	+		Synpcc7942_1872	0.11	-0.3
1,944,391	+		Synpcc7942_1872	0.30	-0.7
1,944,401	+		Synpcc7942_1872	0.31	-0.8
1,944,401	+		Synpcc7942_1872	0.31	-0.4
1,944,501	-		Synpcc7942_1872	0.38	-0.4
1,944,553	+		Synpcc7942_1872	0.42	+0.3
1,944,669	+		Synpcc7942_1872	0.50	+0.5
1,944,711	-		Synpcc7942_1872	0.52	-0.2