Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1109

Experiment: BG11 with Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Fusidic 0.5 mg/ml
1,124,680	+		Synpcc7942_1107	0.49	+0.7
1,124,688	-		Synpcc7942_1107	0.50	-0.3
1,124,691	+		Synpcc7942_1107	0.50	-0.7
1,124,693	-		Synpcc7942_1107	0.50	+2.1
1,124,701	+		Synpcc7942_1107	0.51	-1.3
1,124,701	+		Synpcc7942_1107	0.51	+0.3
1,124,701	+		Synpcc7942_1107	0.51	-0.1
1,124,707	+		Synpcc7942_1107	0.52	-0.7
1,124,709	-		Synpcc7942_1107	0.52	+0.0
1,124,709	-		Synpcc7942_1107	0.52	-0.3
1,124,709	-		Synpcc7942_1107	0.52	-2.1
1,124,709	-		Synpcc7942_1107	0.52	+0.6
1,124,709	-		Synpcc7942_1107	0.52	+1.9
1,124,720	-		Synpcc7942_1107	0.54	+0.6
1,124,738	+		Synpcc7942_1107	0.56	-0.2
1,124,753	+		Synpcc7942_1107	0.58	-0.2
1,124,768	+		Synpcc7942_1107	0.60	-2.8
1,124,776	+		Synpcc7942_1107	0.61	+0.0
1,124,776	-		Synpcc7942_1107	0.61	-0.5
1,124,786	-		Synpcc7942_1107	0.62	+0.0
1,124,791	-		Synpcc7942_1107	0.63	-0.7
1,124,812	+		Synpcc7942_1107	0.65	+0.0
1,124,813	+		Synpcc7942_1107	0.65	-0.5
1,124,820	-		Synpcc7942_1107	0.66	-0.3
1,124,821	-		Synpcc7942_1107	0.66	-0.2
1,124,821	-		Synpcc7942_1107	0.66	-0.9
1,124,823	+		Synpcc7942_1107	0.67	-0.4
1,124,866	-		Synpcc7942_1107	0.72	+0.2
1,124,866	-		Synpcc7942_1107	0.72	-0.2
1,124,873	+		Synpcc7942_1107	0.73	+0.2
1,124,873	+		Synpcc7942_1107	0.73	-1.1
1,124,873	+		Synpcc7942_1107	0.73	+0.5
1,124,881	-		Synpcc7942_1107	0.74	+0.1
1,124,881	-		Synpcc7942_1107	0.74	+0.2
1,124,881	-		Synpcc7942_1107	0.74	-0.9
1,124,891	-		Synpcc7942_1107	0.75	-0.0
1,124,891	-		Synpcc7942_1107	0.75	-0.3
1,124,896	-		Synpcc7942_1107	0.76	-0.6
1,124,926	+		Synpcc7942_1107	0.80	+0.3
1,124,937	+		Synpcc7942_1107	0.81	+0.2
1,124,937	+		Synpcc7942_1107	0.81	+2.1
1,124,937	+		Synpcc7942_1107	0.81	-1.3
1,124,942	+		Synpcc7942_1107	0.82	+0.6
1,124,945	-		Synpcc7942_1107	0.82	-0.8
1,124,948	+		Synpcc7942_1107	0.82	-1.5
1,124,950	-		Synpcc7942_1107	0.83	-1.1
1,124,951	-		Synpcc7942_1107	0.83	-0.3
1,124,956	-		Synpcc7942_1107	0.83	-1.8
1,124,963	-		Synpcc7942_1107	0.84	-0.0
1,124,978	-		Synpcc7942_1107	0.86	-1.2
1,124,980	-		Synpcc7942_1107	0.86	+1.9
1,124,986	+		Synpcc7942_1107	0.87	-2.1
1,125,000	+		Synpcc7942_1107	0.89	-1.1
1,125,000	+		Synpcc7942_1107	0.89	+0.0
1,125,036	+				-2.2
1,125,051	+				+0.0
1,125,079	+				-0.2
1,125,079	+				-0.6
1,125,080	-				-2.2
1,125,080	-				-1.0
1,125,087	-				-0.3
1,125,125	+				-1.1
1,125,186	-				+0.0
1,125,186	-				+0.7
1,125,236	+				-1.0
1,125,244	-				+0.5
1,125,244	-				-0.5
1,125,251	+				+0.3
1,125,262	+				+0.9
1,125,263	+				-0.3
1,125,263	+				+0.3
1,125,263	+				-0.5
1,125,273	+				-0.3
1,125,282	-				+1.7
1,125,375	+				-1.8
1,125,375	+				-0.5
1,125,468	+	Hbs or HU-like	Synpcc7942_1108	0.34	-0.4
1,125,500	+	Hbs or HU-like	Synpcc7942_1108	0.46	-0.2
1,125,518	+	Hbs or HU-like	Synpcc7942_1108	0.53	-0.5
1,125,542	+	Hbs or HU-like	Synpcc7942_1108	0.61	-1.3
1,125,548	-	Hbs or HU-like	Synpcc7942_1108	0.63	+1.0
1,125,631	-				-0.7
1,125,641	+				+2.3
1,125,652	-				-1.3
1,125,664	+				-0.3
1,125,664	+				-0.5
1,125,664	+				-1.1
1,125,672	-				+0.5
1,125,672	-				-2.9
1,125,672	-				-0.5
1,125,675	+				-0.8
1,125,677	-				-1.2
1,126,719	+				-1.6
1,126,724	+				-0.1
1,126,732	-				-1.3
1,126,743	+				+1.7
1,126,751	+				+1.8
1,126,762	+				+0.3
1,126,764	+				-0.4
1,126,764	+				-0.1
1,126,764	+				+0.3
1,126,764	+				-0.4
1,126,764	+				-2.3
1,126,764	+				+1.6
1,126,764	+				-0.9
1,126,772	-				-0.3
1,126,772	-				-0.6
1,126,774	-				+1.2
1,126,784	-				-0.4
1,126,784	-				+0.9
1,126,807	-				-0.6
1,126,812	-				-0.3
1,126,812	-				+0.0
1,126,838	+				-0.8
1,126,856	+				-0.6
1,126,856	+				-0.7
1,126,884	+				+0.3
1,126,904	-				+0.3
1,126,934	+				-0.9
1,126,945	+				-0.3
1,126,950	+				-0.7
1,126,984	-		Synpcc7942_1110	0.13	+1.3
1,126,984	-		Synpcc7942_1110	0.13	-0.7
1,126,989	-		Synpcc7942_1110	0.14	-0.6
1,126,996	-		Synpcc7942_1110	0.15	+0.7
1,127,006	-		Synpcc7942_1110	0.17	+1.7
1,127,036	+		Synpcc7942_1110	0.22	+2.2
1,127,081	-		Synpcc7942_1110	0.29	+3.3
1,127,088	+		Synpcc7942_1110	0.30	+2.3
1,127,090	+		Synpcc7942_1110	0.30	+2.3
1,127,098	-		Synpcc7942_1110	0.31	+2.5
1,127,100	+		Synpcc7942_1110	0.32	+4.0
1,127,108	-		Synpcc7942_1110	0.33	+2.5
1,127,134	+		Synpcc7942_1110	0.37	+3.7
1,127,134	+				+2.3
1,127,136	-		Synpcc7942_1110	0.37	+3.2
1,127,147	-		Synpcc7942_1110	0.39	+2.6
1,127,186	+		Synpcc7942_1110	0.45	+3.1
1,127,196	-		Synpcc7942_1110	0.47	+3.2
1,127,198	+		Synpcc7942_1110	0.47	+2.6
1,127,199	+		Synpcc7942_1110	0.48	+2.4
1,127,203	+		Synpcc7942_1110	0.48	+3.0
1,127,206	-		Synpcc7942_1110	0.49	+2.8
1,127,224	-		Synpcc7942_1110	0.52	+2.1
1,127,228	-		Synpcc7942_1110	0.52	+2.3
1,127,242	-		Synpcc7942_1110	0.54	+3.2
1,127,249	-		Synpcc7942_1110	0.56	+3.7
1,127,253	+		Synpcc7942_1110	0.56	+3.2
1,127,259	-		Synpcc7942_1110	0.57	+2.8
1,127,260	+		Synpcc7942_1110	0.57	+3.0
1,127,267	-		Synpcc7942_1110	0.58	+1.9
1,127,274	+		Synpcc7942_1110	0.59	+2.2
1,127,280	-		Synpcc7942_1110	0.60	+2.4
1,127,320	-		Synpcc7942_1110	0.67	+2.1
1,127,328	+		Synpcc7942_1110	0.68	+3.0
1,127,328	+		Synpcc7942_1110	0.68	+3.2
1,127,332	+		Synpcc7942_1110	0.69	+2.7
1,127,332	+		Synpcc7942_1110	0.69	+3.3
1,127,340	-				+3.0
1,127,351	+		Synpcc7942_1110	0.72	+2.4
1,127,351	+		Synpcc7942_1110	0.72	+1.7
1,127,359	-		Synpcc7942_1110	0.73	+3.7
1,127,359	-		Synpcc7942_1110	0.73	+2.6
1,127,359	-		Synpcc7942_1110	0.73	+1.7
1,127,359	-		Synpcc7942_1110	0.73	+2.9
1,127,359	-		Synpcc7942_1110	0.73	+2.6
1,127,359	-		Synpcc7942_1110	0.73	+1.7
1,127,364	-		Synpcc7942_1110	0.74	+3.6
1,127,377	+		Synpcc7942_1110	0.76	+2.5
1,127,408	+		Synpcc7942_1110	0.81	+1.5
1,127,413	-		Synpcc7942_1110	0.82	+3.1
1,127,418	-		Synpcc7942_1110	0.82	+3.6
1,127,423	-		Synpcc7942_1110	0.83	+1.9
1,127,430	-		Synpcc7942_1110	0.84	+2.3
1,127,439	-		Synpcc7942_1110	0.86	+2.9
1,127,503	-				+0.8
1,127,518	-				+0.6
1,127,534	-				-0.8
1,127,536	+				-0.3
1,127,551	+				+1.2
1,127,574	-				+2.0
1,127,585	-				-0.8
1,127,588	+				-0.2
1,127,596	-				-0.5
1,127,596	-				-2.5
1,127,625	-				+0.8
1,127,630	-				+2.1
1,127,687	-				-0.4