Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2174

Experiment: BG11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11
2,252,951	+				-0.3
2,252,951	+				-0.3
2,252,951	+				-3.7
2,252,958	+				-2.8
2,252,959	-				+1.0
2,252,959	-				-2.7
2,252,986	+				+0.4
2,253,048	+		Synpcc7942_2172	0.33	-2.5
2,253,059	+		Synpcc7942_2172	0.38	-0.6
2,253,119	+		Synpcc7942_2172	0.61	-0.3
2,253,127	-		Synpcc7942_2172	0.64	+0.2
2,253,181	+		Synpcc7942_2172	0.84	-1.3
2,253,234	+				+0.0
2,253,242	-				-1.9
2,253,242	-				-0.3
2,253,247	-				+0.0
2,253,312	-	idiC	Synpcc7942_2173	0.17	+0.4
2,253,319	+	idiC	Synpcc7942_2173	0.18	-5.1
2,253,334	-	idiC	Synpcc7942_2173	0.21	-1.4
2,253,353	+	idiC	Synpcc7942_2173	0.24	-1.2
2,253,355	-	idiC	Synpcc7942_2173	0.24	-1.4
2,253,394	-	idiC	Synpcc7942_2173	0.31	-2.8
2,253,420	+	idiC	Synpcc7942_2173	0.36	-2.6
2,253,420	+	idiC	Synpcc7942_2173	0.36	-2.4
2,253,447	-	idiC	Synpcc7942_2173	0.41	-0.8
2,253,482	+	idiC	Synpcc7942_2173	0.47	-0.8
2,253,492	+	idiC	Synpcc7942_2173	0.49	-1.3
2,253,604	+	idiC	Synpcc7942_2173	0.69	-1.8
2,253,654	-	idiC	Synpcc7942_2173	0.78	-1.0
2,253,673	-	idiC	Synpcc7942_2173	0.81	-1.6
2,253,683	-	idiC	Synpcc7942_2173	0.83	-3.0
2,253,700	-	idiC	Synpcc7942_2173	0.86	-1.6
2,253,735	-				-1.6
2,253,818	-				-1.2
2,253,908	+				-1.0
2,253,908	+				-0.4
2,253,916	-				-2.2
2,253,916	-				-1.4
2,253,916	-				-1.8
2,253,918	+				-3.1
2,254,018	-	idiB	Synpcc7942_2174	0.23	-3.4
2,254,065	-	idiB	Synpcc7942_2174	0.30	-1.4
2,254,071	+	idiB	Synpcc7942_2174	0.31	-1.3
2,254,086	+	idiB	Synpcc7942_2174	0.33	-1.4
2,254,100	-	idiB	Synpcc7942_2174	0.36	+1.0
2,254,172	+	idiB	Synpcc7942_2174	0.47	-2.9
2,254,172	+	idiB	Synpcc7942_2174	0.47	+0.0
2,254,180	-	idiB	Synpcc7942_2174	0.48	-1.0
2,254,180	-	idiB	Synpcc7942_2174	0.48	-1.7
2,254,181	+	idiB	Synpcc7942_2174	0.49	-1.6
2,254,186	+	idiB	Synpcc7942_2174	0.49	-0.8
2,254,189	-	idiB	Synpcc7942_2174	0.50	-0.6
2,254,190	-	idiB	Synpcc7942_2174	0.50	-0.6
2,254,194	+	idiB	Synpcc7942_2174	0.51	+0.4
2,254,202	-	idiB	Synpcc7942_2174	0.52	-1.4
2,254,228	+	idiB	Synpcc7942_2174	0.56	-1.2
2,254,228	+	idiB	Synpcc7942_2174	0.56	+0.0
2,254,236	-	idiB	Synpcc7942_2174	0.57	-0.1
2,254,236	-	idiB	Synpcc7942_2174	0.57	+0.4
2,254,236	-	idiB	Synpcc7942_2174	0.57	-1.2
2,254,253	+	idiB	Synpcc7942_2174	0.60	-2.5
2,254,303	+	idiB	Synpcc7942_2174	0.68	-1.6
2,254,333	-	idiB	Synpcc7942_2174	0.73	-0.3
2,254,342	+	idiB	Synpcc7942_2174	0.74	-2.2
2,254,416	-	idiB	Synpcc7942_2174	0.86	+0.0
2,254,469	+				-3.6
2,254,521	-				+0.7
2,254,546	+				+2.0
2,254,586	-				-0.4
2,254,626	-				+1.7
2,254,706	-				-1.2
2,254,706	-				-1.4
2,254,710	+				-0.3
2,254,712	+				-1.1
2,254,720	-				+0.1
2,254,720	-				-1.7
2,254,720	-				+1.0
2,254,751	-				-0.7
2,254,806	-				-1.3
2,254,845	-				+0.4
2,254,870	-	idiA	Synpcc7942_2175	0.11	-2.1
2,254,878	+	idiA	Synpcc7942_2175	0.12	+1.6
2,254,892	+	idiA	Synpcc7942_2175	0.13	+0.4
2,254,903	+	idiA	Synpcc7942_2175	0.14	-1.0
2,254,958	+	idiA	Synpcc7942_2175	0.19	-0.3
2,254,958	-	idiA	Synpcc7942_2175	0.19	+0.4
2,254,958	-	idiA	Synpcc7942_2175	0.19	+1.3
2,254,960	+	idiA	Synpcc7942_2175	0.19	+1.4
2,255,009	+	idiA	Synpcc7942_2175	0.24	-0.6
2,255,167	+	idiA	Synpcc7942_2175	0.38	+0.0
2,255,194	+	idiA	Synpcc7942_2175	0.41	+0.6
2,255,202	-	idiA	Synpcc7942_2175	0.41	-0.3
2,255,202	-	idiA	Synpcc7942_2175	0.41	-2.0
2,255,234	+	idiA	Synpcc7942_2175	0.44	+0.0
2,255,242	-	idiA	Synpcc7942_2175	0.45	-0.8
2,255,272	+				+1.6
2,255,279	-	idiA	Synpcc7942_2175	0.48	-0.8
2,255,283	+	idiA	Synpcc7942_2175	0.49	-1.3
2,255,283	+	idiA	Synpcc7942_2175	0.49	-1.9
2,255,324	-	idiA	Synpcc7942_2175	0.52	+0.0
2,255,334	-	idiA	Synpcc7942_2175	0.53	+2.0
2,255,339	+	idiA	Synpcc7942_2175	0.54	-1.0
2,255,341	+	idiA	Synpcc7942_2175	0.54	+3.6
2,255,360	-	idiA	Synpcc7942_2175	0.56	-1.2
2,255,380	-	idiA	Synpcc7942_2175	0.57	+0.4
2,255,396	+	idiA	Synpcc7942_2175	0.59	-1.0
2,255,396	+	idiA	Synpcc7942_2175	0.59	+2.0
2,255,404	-	idiA	Synpcc7942_2175	0.60	-0.6
2,255,406	+	idiA	Synpcc7942_2175	0.60	-0.8
2,255,406	+	idiA	Synpcc7942_2175	0.60	-0.3
2,255,427	-	idiA	Synpcc7942_2175	0.62	+0.2
2,255,458	-	idiA	Synpcc7942_2175	0.65	-0.8
2,255,460	+	idiA	Synpcc7942_2175	0.65	-0.3
2,255,499	-	idiA	Synpcc7942_2175	0.68	+1.0
2,255,500	+	idiA	Synpcc7942_2175	0.68	-0.8
2,255,500	+	idiA	Synpcc7942_2175	0.68	+1.0
2,255,500	+				+0.4