Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0006

Experiment: BG11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11
6,794	-		Synpcc7942_0005	0.43	-0.8
6,819	+		Synpcc7942_0005	0.44	-0.0
6,878	+		Synpcc7942_0005	0.48	-0.9
6,886	+		Synpcc7942_0005	0.49	+0.7
6,886	-		Synpcc7942_0005	0.49	+0.0
6,886	-		Synpcc7942_0005	0.49	-0.1
6,895	+		Synpcc7942_0005	0.49	-2.6
6,895	+		Synpcc7942_0005	0.49	+0.4
6,895	+		Synpcc7942_0005	0.49	+0.1
6,903	-		Synpcc7942_0005	0.50	+0.5
6,903	-		Synpcc7942_0005	0.50	-0.2
6,922	+		Synpcc7942_0005	0.51	+1.0
6,927	-		Synpcc7942_0005	0.51	-1.0
6,930	-		Synpcc7942_0005	0.51	-0.1
6,971	+		Synpcc7942_0005	0.54	+0.0
6,977	+		Synpcc7942_0005	0.54	+0.2
6,979	-		Synpcc7942_0005	0.54	-0.6
6,980	-		Synpcc7942_0005	0.54	-0.9
6,980	-		Synpcc7942_0005	0.54	+1.5
6,999	+		Synpcc7942_0005	0.56	+1.5
7,059	-		Synpcc7942_0005	0.59	+0.6
7,059	-		Synpcc7942_0005	0.59	-0.5
7,096	-		Synpcc7942_0005	0.62	+0.7
7,185	-		Synpcc7942_0005	0.67	-0.4
7,191	+		Synpcc7942_0005	0.68	-0.5
7,191	+		Synpcc7942_0005	0.68	+0.1
7,199	-		Synpcc7942_0005	0.68	+0.7
7,236	-		Synpcc7942_0005	0.70	+1.6
7,236	-		Synpcc7942_0005	0.70	-0.2
7,236	-		Synpcc7942_0005	0.70	+0.1
7,261	-		Synpcc7942_0005	0.72	-1.5
7,273	-		Synpcc7942_0005	0.73	+0.0
7,282	+		Synpcc7942_0005	0.73	+0.9
7,290	-		Synpcc7942_0005	0.74	-0.1
7,304	-		Synpcc7942_0005	0.75	-0.5
7,309	-		Synpcc7942_0005	0.75	+0.0
7,309	-				+0.3
7,318	+		Synpcc7942_0005	0.76	+0.6
7,326	-		Synpcc7942_0005	0.76	-1.7
7,367	+		Synpcc7942_0005	0.79	+0.7
7,367	+		Synpcc7942_0005	0.79	+1.1
7,374	+		Synpcc7942_0005	0.79	-0.7
7,376	-		Synpcc7942_0005	0.79	+1.2
7,382	-		Synpcc7942_0005	0.80	-0.4
7,417	+		Synpcc7942_0005	0.82	-0.1
7,427	+		Synpcc7942_0005	0.82	+0.7
7,476	+		Synpcc7942_0005	0.86	+1.5
7,484	+		Synpcc7942_0005	0.86	+0.3
7,484	-		Synpcc7942_0005	0.86	+0.3
7,511	+		Synpcc7942_0005	0.88	-0.1
7,517	-		Synpcc7942_0005	0.88	-1.1
7,517	-		Synpcc7942_0005	0.88	+0.0
7,517	-		Synpcc7942_0005	0.88	-1.2
7,584	+				-0.0
7,595	-				-0.1
7,602	-				-1.5
7,604	+				+1.3
7,604	+				+0.3
7,604	+				-0.1
7,604	+				-0.3
7,612	-				+0.9
7,612	-				-0.1
7,612	-				+0.1
7,631	+				-1.5
7,655	+				+0.3
7,755	+				+0.6
7,758	-				-0.3
7,762	+				+0.3
7,762	+				-0.7
7,763	-				-0.2
7,764	+				+0.3
7,822	+		Synpcc7942_0006	0.10	-3.4
7,827	+		Synpcc7942_0006	0.12	-3.6
7,830	-		Synpcc7942_0006	0.12	-2.4
7,866	-		Synpcc7942_0006	0.21	-2.5
7,920	+		Synpcc7942_0006	0.34	-0.9
7,929	-		Synpcc7942_0006	0.36	-2.1
7,931	-		Synpcc7942_0006	0.37	+0.2
7,931	-		Synpcc7942_0006	0.37	-3.3
7,931	-		Synpcc7942_0006	0.37	-4.5
7,931	-		Synpcc7942_0006	0.37	-4.1
7,955	+		Synpcc7942_0006	0.43	-3.9
7,955	+		Synpcc7942_0006	0.43	-2.9
7,980	+		Synpcc7942_0006	0.49	-2.4
8,003	+		Synpcc7942_0006	0.54	-3.0
8,011	-		Synpcc7942_0006	0.56	-2.4
8,011	-		Synpcc7942_0006	0.56	-3.4
8,011	-		Synpcc7942_0006	0.56	-4.2
8,014	-		Synpcc7942_0006	0.57	-1.9
8,026	+		Synpcc7942_0006	0.60	-1.7
8,052	+		Synpcc7942_0006	0.66	-1.6
8,053	-		Synpcc7942_0006	0.66	-4.7
8,078	-		Synpcc7942_0006	0.72	-2.4
8,080	+		Synpcc7942_0006	0.73	-2.8
8,097	-		Synpcc7942_0006	0.77	-3.5
8,122	+		Synpcc7942_0006	0.83	-2.0
8,132	+		Synpcc7942_0006	0.85	-4.5
8,135	-		Synpcc7942_0006	0.86	-2.1
8,140	-		Synpcc7942_0006	0.87	-0.4
8,150	-		Synpcc7942_0006	0.90	-2.2
8,208	+				-3.9
8,216	-				-3.2
8,219	-				-3.9
8,267	+		Synpcc7942_0007	0.22	-4.3
8,292	+		Synpcc7942_0007	0.29	-4.7
8,292	+		Synpcc7942_0007	0.29	-2.5
8,292	+		Synpcc7942_0007	0.29	-3.8
8,292	+		Synpcc7942_0007	0.29	-5.4
8,298	+		Synpcc7942_0007	0.31	-2.7
8,320	-		Synpcc7942_0007	0.37	-2.5
8,320	-		Synpcc7942_0007	0.37	-2.9
8,320	-		Synpcc7942_0007	0.37	-2.3
8,320	-		Synpcc7942_0007	0.37	-4.8
8,346	+		Synpcc7942_0007	0.45	-4.4
8,354	-		Synpcc7942_0007	0.47	-2.5
8,357	-		Synpcc7942_0007	0.48	-2.6
8,405	-		Synpcc7942_0007	0.62	-2.3
8,410	+		Synpcc7942_0007	0.63	-4.2
8,410	+		Synpcc7942_0007	0.63	-3.5
8,423	+		Synpcc7942_0007	0.67	-3.3
8,440	+		Synpcc7942_0007	0.72	-3.6
8,448	-		Synpcc7942_0007	0.74	-5.2
8,458	-		Synpcc7942_0007	0.77	-3.0
8,460	+		Synpcc7942_0007	0.77	-1.9
8,468	-		Synpcc7942_0007	0.79	-3.6
8,490	-		Synpcc7942_0007	0.86	-3.3
8,501	+		Synpcc7942_0007	0.89	-1.4
8,501	+		Synpcc7942_0007	0.89	-4.2
8,508	-				-3.8
8,511	+				-0.5
8,532	+				-0.6
8,534	+				+0.0
8,544	-				-1.2
8,564	+				-3.4
8,567	+				-2.9
8,572	-		Synpcc7942_0008	0.11	-2.4
8,643	+		Synpcc7942_0008	0.33	-3.5
8,643	+		Synpcc7942_0008	0.33	-4.0
8,643	+		Synpcc7942_0008	0.33	-1.5
8,643	+		Synpcc7942_0008	0.33	-2.0
8,651	-		Synpcc7942_0008	0.35	-2.5
8,651	-		Synpcc7942_0008	0.35	-5.6
8,669	-		Synpcc7942_0008	0.41	-4.6
8,696	-		Synpcc7942_0008	0.49	-0.1
8,710	+		Synpcc7942_0008	0.54	-4.8
8,715	+		Synpcc7942_0008	0.55	-3.4
8,715	+		Synpcc7942_0008	0.55	-2.6
8,718	-		Synpcc7942_0008	0.56	-2.0
8,720	+		Synpcc7942_0008	0.57	-3.8
8,720	+		Synpcc7942_0008	0.57	-2.5
8,720	+		Synpcc7942_0008	0.57	-1.9
8,720	+		Synpcc7942_0008	0.57	-4.4
8,728	-		Synpcc7942_0008	0.59	-3.7
8,728	-		Synpcc7942_0008	0.59	-3.4
8,728	-		Synpcc7942_0008	0.59	-4.3
8,738	+		Synpcc7942_0008	0.62	-2.8
8,783	+		Synpcc7942_0008	0.76	-2.9
8,801	+		Synpcc7942_0008	0.82	-3.2
8,801	+		Synpcc7942_0008	0.82	-2.0
8,801	+		Synpcc7942_0008	0.82	-3.8
8,806	+		Synpcc7942_0008	0.83	-2.8
8,809	-		Synpcc7942_0008	0.84	-1.5
8,809	-		Synpcc7942_0008	0.84	-3.0
8,809	-		Synpcc7942_0008	0.84	-3.3
8,809	-		Synpcc7942_0008	0.84	-0.1
8,809	-		Synpcc7942_0008	0.84	-3.5
8,846	+				-3.9
8,859	+				+0.3
8,868	+				-2.7
8,881	-				-1.9
8,897	+				+0.4
8,903	+				-0.2
8,905	-				+0.9