Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23510 and HSERO_RS23515 are separated by 7 nucleotides HSERO_RS23515 and HSERO_RS23520 are separated by 307 nucleotides
HSERO_RS23510: HSERO_RS23510 - MFS transporter, at 5,390,587 to 5,391,795
_RS23510
HSERO_RS23515: HSERO_RS23515 - lipoprotein, at 5,391,803 to 5,392,612
_RS23515
HSERO_RS23520: HSERO_RS23520 - histidinol-phosphate aminotransferase, at 5,392,920 to 5,394,002
_RS23520
Position (kb) 5391
5392
5393 Strain fitness (log2 ratio) -1
0
1
2 at 5390.907 kb on - strand, within HSERO_RS23510 at 5390.951 kb on - strand, within HSERO_RS23510 at 5391.044 kb on - strand, within HSERO_RS23510 at 5391.044 kb on - strand, within HSERO_RS23510 at 5391.060 kb on - strand, within HSERO_RS23510 at 5391.234 kb on - strand, within HSERO_RS23510 at 5391.287 kb on + strand, within HSERO_RS23510 at 5391.291 kb on - strand, within HSERO_RS23510 at 5391.295 kb on - strand, within HSERO_RS23510 at 5391.321 kb on + strand, within HSERO_RS23510 at 5391.333 kb on + strand at 5391.372 kb on + strand, within HSERO_RS23510 at 5391.375 kb on - strand, within HSERO_RS23510 at 5391.568 kb on + strand, within HSERO_RS23510 at 5391.620 kb on + strand, within HSERO_RS23510 at 5392.089 kb on + strand, within HSERO_RS23515 at 5392.121 kb on + strand, within HSERO_RS23515 at 5392.340 kb on + strand, within HSERO_RS23515 at 5392.708 kb on + strand at 5392.708 kb on + strand at 5392.791 kb on + strand at 5392.791 kb on + strand at 5392.976 kb on - strand at 5393.271 kb on - strand, within HSERO_RS23520 at 5393.282 kb on - strand, within HSERO_RS23520 at 5393.333 kb on - strand, within HSERO_RS23520 at 5393.372 kb on - strand, within HSERO_RS23520 at 5393.381 kb on + strand, within HSERO_RS23520 at 5393.386 kb on + strand, within HSERO_RS23520 at 5393.394 kb on - strand, within HSERO_RS23520 at 5393.488 kb on + strand, within HSERO_RS23520 at 5393.596 kb on - strand, within HSERO_RS23520
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 5,390,907 - HSERO_RS23510 0.26 +0.6 5,390,951 - HSERO_RS23510 0.30 -0.2 5,391,044 - HSERO_RS23510 0.38 +0.5 5,391,044 - HSERO_RS23510 0.38 +0.2 5,391,060 - HSERO_RS23510 0.39 -0.1 5,391,234 - HSERO_RS23510 0.54 +1.1 5,391,287 + HSERO_RS23510 0.58 -0.5 5,391,291 - HSERO_RS23510 0.58 +1.9 5,391,295 - HSERO_RS23510 0.59 +1.2 5,391,321 + HSERO_RS23510 0.61 +0.3 5,391,333 + -0.2 5,391,372 + HSERO_RS23510 0.65 -1.3 5,391,375 - HSERO_RS23510 0.65 -0.1 5,391,568 + HSERO_RS23510 0.81 -0.9 5,391,620 + HSERO_RS23510 0.85 +0.5 5,392,089 + HSERO_RS23515 0.35 -0.4 5,392,121 + HSERO_RS23515 0.39 -0.6 5,392,340 + HSERO_RS23515 0.66 -1.2 5,392,708 + -0.6 5,392,708 + +0.1 5,392,791 + +0.2 5,392,791 + -0.1 5,392,976 - -0.0 5,393,271 - HSERO_RS23520 0.32 -0.1 5,393,282 - HSERO_RS23520 0.33 -0.0 5,393,333 - HSERO_RS23520 0.38 -0.8 5,393,372 - HSERO_RS23520 0.42 -0.0 5,393,381 + HSERO_RS23520 0.43 -0.8 5,393,386 + HSERO_RS23520 0.43 -0.1 5,393,394 - HSERO_RS23520 0.44 +0.4 5,393,488 + HSERO_RS23520 0.52 +0.5 5,393,596 - HSERO_RS23520 0.62 -0.1
Or see this region's nucleotide sequence