Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23200 and HSERO_RS23205 are separated by 116 nucleotides HSERO_RS23205 and HSERO_RS23210 are separated by 101 nucleotides HSERO_RS23210 and HSERO_RS23215 are separated by 454 nucleotides
HSERO_RS23200: HSERO_RS23200 - LysR family transcriptional regulator, at 5,323,174 to 5,324,100
_RS23200
HSERO_RS23205: HSERO_RS23205 - 3-beta hydroxysteroid dehydrogenase, at 5,324,217 to 5,324,828
_RS23205
HSERO_RS23210: HSERO_RS23210 - protein-disulfide isomerase, at 5,324,930 to 5,325,655
_RS23210
HSERO_RS23215: HSERO_RS23215 - methyl-accepting chemotaxis protein, at 5,326,110 to 5,327,678
_RS23215
Position (kb) 5324
5325
5326 Strain fitness (log2 ratio) -1
0
1
2 at 5324.140 kb on + strand at 5324.685 kb on + strand, within HSERO_RS23205 at 5324.693 kb on - strand, within HSERO_RS23205 at 5324.693 kb on - strand, within HSERO_RS23205 at 5324.789 kb on + strand at 5324.789 kb on + strand at 5324.789 kb on + strand at 5324.857 kb on - strand at 5324.857 kb on - strand at 5325.441 kb on - strand, within HSERO_RS23210 at 5325.518 kb on - strand, within HSERO_RS23210 at 5325.613 kb on - strand at 5325.615 kb on + strand at 5325.615 kb on + strand at 5325.707 kb on - strand at 5325.908 kb on + strand at 5325.932 kb on - strand at 5325.997 kb on + strand at 5326.347 kb on - strand, within HSERO_RS23215 at 5326.394 kb on - strand, within HSERO_RS23215 at 5326.439 kb on - strand, within HSERO_RS23215 at 5326.484 kb on - strand, within HSERO_RS23215 at 5326.489 kb on + strand, within HSERO_RS23215 at 5326.501 kb on + strand, within HSERO_RS23215 at 5326.504 kb on - strand, within HSERO_RS23215 at 5326.511 kb on + strand, within HSERO_RS23215
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 5,324,140 + +0.5 5,324,685 + HSERO_RS23205 0.76 +1.2 5,324,693 - HSERO_RS23205 0.78 +0.4 5,324,693 - HSERO_RS23205 0.78 +0.9 5,324,789 + -1.1 5,324,789 + -0.6 5,324,789 + -0.0 5,324,857 - +0.1 5,324,857 - +0.7 5,325,441 - HSERO_RS23210 0.70 -0.1 5,325,518 - HSERO_RS23210 0.81 +1.2 5,325,613 - -0.4 5,325,615 + -0.7 5,325,615 + -0.5 5,325,707 - -0.5 5,325,908 + +0.2 5,325,932 - -0.4 5,325,997 + +0.2 5,326,347 - HSERO_RS23215 0.15 -1.0 5,326,394 - HSERO_RS23215 0.18 +0.0 5,326,439 - HSERO_RS23215 0.21 -0.8 5,326,484 - HSERO_RS23215 0.24 -0.1 5,326,489 + HSERO_RS23215 0.24 +0.2 5,326,501 + HSERO_RS23215 0.25 +0.7 5,326,504 - HSERO_RS23215 0.25 +2.5 5,326,511 + HSERO_RS23215 0.26 +1.1
Or see this region's nucleotide sequence