Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22410 and HSERO_RS22415 are separated by 92 nucleotides HSERO_RS22415 and HSERO_RS22420 are separated by 12 nucleotides HSERO_RS22420 and HSERO_RS22425 are separated by 153 nucleotides
HSERO_RS22410: HSERO_RS22410 - alpha/beta hydrolase, at 5,129,959 to 5,130,744
_RS22410
HSERO_RS22415: HSERO_RS22415 - hypothetical protein, at 5,130,837 to 5,131,145
_RS22415
HSERO_RS22420: HSERO_RS22420 - azoreductase, at 5,131,158 to 5,131,784
_RS22420
HSERO_RS22425: HSERO_RS22425 - LysR family transcriptional regulator, at 5,131,938 to 5,132,822
_RS22425
Position (kb) 5131
5132 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5130.216 kb on + strand, within HSERO_RS22410 at 5130.248 kb on - strand, within HSERO_RS22410 at 5130.284 kb on + strand, within HSERO_RS22410 at 5130.437 kb on + strand, within HSERO_RS22410 at 5130.528 kb on - strand, within HSERO_RS22410 at 5130.557 kb on + strand, within HSERO_RS22410 at 5130.661 kb on - strand, within HSERO_RS22410 at 5130.686 kb on + strand at 5130.694 kb on - strand at 5130.845 kb on + strand at 5130.927 kb on + strand, within HSERO_RS22415 at 5130.940 kb on - strand, within HSERO_RS22415 at 5131.218 kb on - strand at 5131.308 kb on - strand, within HSERO_RS22420 at 5131.392 kb on - strand, within HSERO_RS22420 at 5131.472 kb on - strand, within HSERO_RS22420 at 5131.705 kb on + strand, within HSERO_RS22420 at 5131.723 kb on - strand at 5131.858 kb on - strand at 5131.915 kb on + strand at 5131.927 kb on + strand at 5132.088 kb on + strand, within HSERO_RS22425 at 5132.156 kb on - strand, within HSERO_RS22425 at 5132.175 kb on + strand, within HSERO_RS22425 at 5132.181 kb on - strand, within HSERO_RS22425 at 5132.206 kb on - strand, within HSERO_RS22425 at 5132.452 kb on + strand, within HSERO_RS22425 at 5132.460 kb on - strand, within HSERO_RS22425 at 5132.683 kb on + strand, within HSERO_RS22425 at 5132.691 kb on - strand, within HSERO_RS22425 at 5132.709 kb on - strand, within HSERO_RS22425 at 5132.723 kb on + strand, within HSERO_RS22425
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 5,130,216 + HSERO_RS22410 0.33 -0.9 5,130,248 - HSERO_RS22410 0.37 +0.8 5,130,284 + HSERO_RS22410 0.41 -0.2 5,130,437 + HSERO_RS22410 0.61 -1.3 5,130,528 - HSERO_RS22410 0.72 -0.2 5,130,557 + HSERO_RS22410 0.76 -0.7 5,130,661 - HSERO_RS22410 0.89 -0.3 5,130,686 + -0.1 5,130,694 - -0.1 5,130,845 + +0.3 5,130,927 + HSERO_RS22415 0.29 -0.6 5,130,940 - HSERO_RS22415 0.33 +0.2 5,131,218 - -1.3 5,131,308 - HSERO_RS22420 0.24 +0.4 5,131,392 - HSERO_RS22420 0.37 +0.5 5,131,472 - HSERO_RS22420 0.50 -0.4 5,131,705 + HSERO_RS22420 0.87 +1.1 5,131,723 - +2.8 5,131,858 - -0.8 5,131,915 + +0.1 5,131,927 + -1.7 5,132,088 + HSERO_RS22425 0.17 +0.3 5,132,156 - HSERO_RS22425 0.25 +0.6 5,132,175 + HSERO_RS22425 0.27 +0.0 5,132,181 - HSERO_RS22425 0.27 -1.0 5,132,206 - HSERO_RS22425 0.30 -2.0 5,132,452 + HSERO_RS22425 0.58 +0.1 5,132,460 - HSERO_RS22425 0.59 +0.8 5,132,683 + HSERO_RS22425 0.84 +0.6 5,132,691 - HSERO_RS22425 0.85 +0.5 5,132,709 - HSERO_RS22425 0.87 +0.6 5,132,723 + HSERO_RS22425 0.89 +1.6
Or see this region's nucleotide sequence