Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18085 and HSERO_RS18090 are separated by 300 nucleotides HSERO_RS18090 and HSERO_RS18095 are separated by 145 nucleotides HSERO_RS18095 and HSERO_RS18100 are separated by 162 nucleotides
HSERO_RS18085: HSERO_RS18085 - pyrimidine permease, at 4,156,475 to 4,157,770
_RS18085
HSERO_RS18090: HSERO_RS18090 - II family cellulose-binding protein, at 4,158,071 to 4,158,487
_RS18090
HSERO_RS18095: HSERO_RS18095 - antibiotic biosynthesis monooxygenase, at 4,158,633 to 4,158,935
_RS18095
HSERO_RS18100: HSERO_RS18100 - hypothetical protein, at 4,159,098 to 4,159,682
_RS18100
Position (kb) 4158
4159 Strain fitness (log2 ratio) -2
-1
0
1 at 4157.666 kb on - strand at 4157.795 kb on + strand at 4158.135 kb on - strand at 4158.354 kb on + strand, within HSERO_RS18090 at 4158.443 kb on - strand, within HSERO_RS18090 at 4158.483 kb on + strand at 4158.543 kb on + strand at 4158.585 kb on - strand at 4158.597 kb on + strand at 4158.645 kb on - strand at 4158.728 kb on + strand, within HSERO_RS18095 at 4158.752 kb on + strand, within HSERO_RS18095 at 4158.763 kb on + strand, within HSERO_RS18095 at 4158.797 kb on + strand, within HSERO_RS18095 at 4158.868 kb on - strand, within HSERO_RS18095 at 4159.170 kb on - strand, within HSERO_RS18100 at 4159.203 kb on + strand, within HSERO_RS18100 at 4159.287 kb on + strand, within HSERO_RS18100 at 4159.491 kb on + strand, within HSERO_RS18100 at 4159.529 kb on - strand, within HSERO_RS18100 at 4159.539 kb on - strand, within HSERO_RS18100 at 4159.583 kb on - strand, within HSERO_RS18100 at 4159.790 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 4,157,666 - +0.8 4,157,795 + -0.4 4,158,135 - +0.9 4,158,354 + HSERO_RS18090 0.68 +0.8 4,158,443 - HSERO_RS18090 0.89 +0.4 4,158,483 + -0.1 4,158,543 + -0.2 4,158,585 - -0.2 4,158,597 + +0.5 4,158,645 - -0.2 4,158,728 + HSERO_RS18095 0.31 -1.2 4,158,752 + HSERO_RS18095 0.39 +1.2 4,158,763 + HSERO_RS18095 0.43 +0.6 4,158,797 + HSERO_RS18095 0.54 +0.1 4,158,868 - HSERO_RS18095 0.78 +0.8 4,159,170 - HSERO_RS18100 0.12 +0.7 4,159,203 + HSERO_RS18100 0.18 +1.4 4,159,287 + HSERO_RS18100 0.32 -1.2 4,159,491 + HSERO_RS18100 0.67 -0.2 4,159,529 - HSERO_RS18100 0.74 -0.2 4,159,539 - HSERO_RS18100 0.75 +0.6 4,159,583 - HSERO_RS18100 0.83 +0.0 4,159,790 + -1.8
Or see this region's nucleotide sequence