Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08040 and HSERO_RS08045 are separated by 231 nucleotides HSERO_RS08045 and HSERO_RS08050 are separated by 366 nucleotides HSERO_RS08050 and HSERO_RS08055 are separated by 14 nucleotides
HSERO_RS08040: HSERO_RS08040 - ATPase AAA, at 1,838,751 to 1,839,593
_RS08040
HSERO_RS08045: HSERO_RS08045 - preprotein translocase subunit TatB, at 1,839,825 to 1,842,062
_RS08045
HSERO_RS08050: HSERO_RS08050 - cytochrome C, at 1,842,429 to 1,842,749
_RS08050
HSERO_RS08055: HSERO_RS08055 - cytochrome C, at 1,842,764 to 1,843,117
_RS08055
Position (kb) 1839
1840
1841
1842
1843 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1838.860 kb on - strand, within HSERO_RS08040 at 1838.908 kb on - strand, within HSERO_RS08040 at 1838.926 kb on - strand, within HSERO_RS08040 at 1838.926 kb on - strand, within HSERO_RS08040 at 1839.435 kb on + strand, within HSERO_RS08040 at 1839.449 kb on - strand, within HSERO_RS08040 at 1839.449 kb on - strand, within HSERO_RS08040 at 1839.496 kb on + strand, within HSERO_RS08040 at 1839.529 kb on - strand at 1840.087 kb on + strand, within HSERO_RS08045 at 1840.109 kb on + strand, within HSERO_RS08045 at 1840.421 kb on - strand, within HSERO_RS08045 at 1840.455 kb on + strand at 1840.611 kb on - strand, within HSERO_RS08045 at 1840.630 kb on - strand, within HSERO_RS08045 at 1840.820 kb on + strand, within HSERO_RS08045 at 1840.916 kb on - strand, within HSERO_RS08045 at 1841.022 kb on - strand, within HSERO_RS08045 at 1841.023 kb on + strand, within HSERO_RS08045 at 1841.066 kb on - strand, within HSERO_RS08045 at 1841.174 kb on + strand, within HSERO_RS08045 at 1841.302 kb on + strand, within HSERO_RS08045 at 1841.384 kb on + strand, within HSERO_RS08045 at 1841.517 kb on - strand, within HSERO_RS08045 at 1841.661 kb on - strand, within HSERO_RS08045 at 1841.982 kb on - strand at 1842.224 kb on + strand at 1842.274 kb on + strand at 1842.702 kb on + strand, within HSERO_RS08050 at 1842.898 kb on - strand, within HSERO_RS08055 at 1842.960 kb on + strand, within HSERO_RS08055 at 1843.036 kb on - strand, within HSERO_RS08055
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 1,838,860 - HSERO_RS08040 0.13 +0.3 1,838,908 - HSERO_RS08040 0.19 +1.1 1,838,926 - HSERO_RS08040 0.21 -0.3 1,838,926 - HSERO_RS08040 0.21 -0.4 1,839,435 + HSERO_RS08040 0.81 -0.0 1,839,449 - HSERO_RS08040 0.83 -0.4 1,839,449 - HSERO_RS08040 0.83 -0.7 1,839,496 + HSERO_RS08040 0.88 +0.2 1,839,529 - +0.3 1,840,087 + HSERO_RS08045 0.12 +1.4 1,840,109 + HSERO_RS08045 0.13 +0.2 1,840,421 - HSERO_RS08045 0.27 +1.1 1,840,455 + -1.0 1,840,611 - HSERO_RS08045 0.35 +0.4 1,840,630 - HSERO_RS08045 0.36 +0.0 1,840,820 + HSERO_RS08045 0.44 +2.8 1,840,916 - HSERO_RS08045 0.49 +0.2 1,841,022 - HSERO_RS08045 0.53 +1.2 1,841,023 + HSERO_RS08045 0.54 +0.4 1,841,066 - HSERO_RS08045 0.55 +0.3 1,841,174 + HSERO_RS08045 0.60 -0.1 1,841,302 + HSERO_RS08045 0.66 +0.6 1,841,384 + HSERO_RS08045 0.70 +0.1 1,841,517 - HSERO_RS08045 0.76 -0.9 1,841,661 - HSERO_RS08045 0.82 -2.1 1,841,982 - +0.2 1,842,224 + +0.2 1,842,274 + -0.6 1,842,702 + HSERO_RS08050 0.85 +0.4 1,842,898 - HSERO_RS08055 0.38 -0.3 1,842,960 + HSERO_RS08055 0.55 -0.1 1,843,036 - HSERO_RS08055 0.77 -0.4
Or see this region's nucleotide sequence