Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03895 and HSERO_RS03900 are separated by 256 nucleotides HSERO_RS03900 and HSERO_RS03905 are separated by 118 nucleotides HSERO_RS03905 and HSERO_RS03910 are separated by 235 nucleotides
HSERO_RS03895: HSERO_RS03895 - SAM-dependent methyltransferase, at 859,155 to 860,726
_RS03895
HSERO_RS03900: HSERO_RS03900 - hypothetical protein, at 860,983 to 861,261
_RS03900
HSERO_RS03905: HSERO_RS03905 - RNA polymerase subunit sigma-24, at 861,380 to 862,114
_RS03905
HSERO_RS03910: HSERO_RS03910 - hypothetical protein, at 862,350 to 863,399
_RS03910
Position (kb) 861
862
863 Strain fitness (log2 ratio) -1
0
1
2
3 at 860.541 kb on + strand, within HSERO_RS03895 at 860.546 kb on + strand, within HSERO_RS03895 at 860.645 kb on + strand at 860.722 kb on + strand at 860.769 kb on + strand at 860.794 kb on + strand at 860.855 kb on - strand at 860.927 kb on - strand at 860.932 kb on - strand at 861.712 kb on - strand, within HSERO_RS03905 at 861.739 kb on - strand, within HSERO_RS03905 at 861.764 kb on - strand, within HSERO_RS03905 at 861.771 kb on - strand, within HSERO_RS03905 at 862.406 kb on + strand at 862.424 kb on - strand at 862.427 kb on + strand at 862.543 kb on - strand, within HSERO_RS03910 at 862.797 kb on + strand, within HSERO_RS03910 at 862.873 kb on - strand, within HSERO_RS03910
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 860,541 + HSERO_RS03895 0.88 -0.9 860,546 + HSERO_RS03895 0.88 -0.3 860,645 + +0.2 860,722 + +0.2 860,769 + +0.6 860,794 + +0.1 860,855 - -0.2 860,927 - -0.2 860,932 - -0.4 861,712 - HSERO_RS03905 0.45 -0.6 861,739 - HSERO_RS03905 0.49 +0.9 861,764 - HSERO_RS03905 0.52 +0.5 861,771 - HSERO_RS03905 0.53 +2.9 862,406 + +0.1 862,424 - +0.1 862,427 + -0.3 862,543 - HSERO_RS03910 0.18 -0.0 862,797 + HSERO_RS03910 0.43 -1.4 862,873 - HSERO_RS03910 0.50 -0.8
Or see this region's nucleotide sequence